Gene RPC_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0961 
Symbol 
ID3969724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1055441 
End bp1056142 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content69% 
IMG OID637924077 
Productalpha/beta hydrolase fold 
Protein accessionYP_530850 
Protein GI90422480 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172489 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT CGATGCCGAT TCTGCTGATT CCTGGGCTCG GCGGCTCGCC GCGGATCTAC 
GCCCCGGTGA TTCCGCAGCT ATGGCGCCAC GGCCCGGTGA CCGTCGCCAA CCATCTCCGC
GACGACTCCA TCGGGGCGAT CGCGCGGCGG ATTCTCGCCG AAGCGCCGCC GCGCTTTGCG
CTGGCCGGGC ATTCGATGGG TGGCTACATC GCCTTGGAGA TCATGCGGCA GGCGCCGGAG
CGGGTGGCCA AGCTCGCCTT GCTCAACACC CAGGCGCGGC CGGACAGCGA CGAGGCCAAG
GAGCGCCGCC GCCGCCAGAT CGAAGCCATC AAAGCCGGCA GCTATAGCGA GGCGGCGGCA
GCGCTGTATC CAGGCTTGGT GCATCCGTCG CGGCATGGCG ACGCCGAACT GCTGGCCGTG
GTCGAAACGA CGGCCGAGGA CGTCGGCCCG GAGGCGTTTA CGCGCCAGCT GGTCGCCATC
ATGGGCCGCT CGGATTCCCG CGCCACGCTG GCCAAGATCA CCTGCCCGAC GCTGGTGCTG
ACCGGCGACC AGGACAACAC CATCCCGAAC GTCTTGTCGG TGGAGTTGGC CGACGGCATT
GCAGGCGCCA AGCTGGTGAC GCTGGCGGAT TGCGGGCATC TGCCGCAGCT CGAGCGTCCC
CGCGAGACCA CCGCGGCGCT GCTCGACTGG TTGCGGATCT GA
 
Protein sequence
MNNSMPILLI PGLGGSPRIY APVIPQLWRH GPVTVANHLR DDSIGAIARR ILAEAPPRFA 
LAGHSMGGYI ALEIMRQAPE RVAKLALLNT QARPDSDEAK ERRRRQIEAI KAGSYSEAAA
ALYPGLVHPS RHGDAELLAV VETTAEDVGP EAFTRQLVAI MGRSDSRATL AKITCPTLVL
TGDQDNTIPN VLSVELADGI AGAKLVTLAD CGHLPQLERP RETTAALLDW LRI