Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0961 |
Symbol | |
ID | 3969724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1055441 |
End bp | 1056142 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637924077 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_530850 |
Protein GI | 90422480 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0172489 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAATT CGATGCCGAT TCTGCTGATT CCTGGGCTCG GCGGCTCGCC GCGGATCTAC GCCCCGGTGA TTCCGCAGCT ATGGCGCCAC GGCCCGGTGA CCGTCGCCAA CCATCTCCGC GACGACTCCA TCGGGGCGAT CGCGCGGCGG ATTCTCGCCG AAGCGCCGCC GCGCTTTGCG CTGGCCGGGC ATTCGATGGG TGGCTACATC GCCTTGGAGA TCATGCGGCA GGCGCCGGAG CGGGTGGCCA AGCTCGCCTT GCTCAACACC CAGGCGCGGC CGGACAGCGA CGAGGCCAAG GAGCGCCGCC GCCGCCAGAT CGAAGCCATC AAAGCCGGCA GCTATAGCGA GGCGGCGGCA GCGCTGTATC CAGGCTTGGT GCATCCGTCG CGGCATGGCG ACGCCGAACT GCTGGCCGTG GTCGAAACGA CGGCCGAGGA CGTCGGCCCG GAGGCGTTTA CGCGCCAGCT GGTCGCCATC ATGGGCCGCT CGGATTCCCG CGCCACGCTG GCCAAGATCA CCTGCCCGAC GCTGGTGCTG ACCGGCGACC AGGACAACAC CATCCCGAAC GTCTTGTCGG TGGAGTTGGC CGACGGCATT GCAGGCGCCA AGCTGGTGAC GCTGGCGGAT TGCGGGCATC TGCCGCAGCT CGAGCGTCCC CGCGAGACCA CCGCGGCGCT GCTCGACTGG TTGCGGATCT GA
|
Protein sequence | MNNSMPILLI PGLGGSPRIY APVIPQLWRH GPVTVANHLR DDSIGAIARR ILAEAPPRFA LAGHSMGGYI ALEIMRQAPE RVAKLALLNT QARPDSDEAK ERRRRQIEAI KAGSYSEAAA ALYPGLVHPS RHGDAELLAV VETTAEDVGP EAFTRQLVAI MGRSDSRATL AKITCPTLVL TGDQDNTIPN VLSVELADGI AGAKLVTLAD CGHLPQLERP RETTAALLDW LRI
|
| |