| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0952 |
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| Symbol | |
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| ID | 3969715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1045879 |
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| End bp | 1048392 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924068 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_530841 |
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| Protein GI | 90422471 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.569758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACTC CCAAGCTCGA TCGCCGTCAG GTGTTGAAAC TCGAAGCCGC CGCGATGGCG
GCGCTGGCCG GCGGCATTGC AATGCCGGCC GCTGCAGCCA ATCTCGTCAC CGAACGCGCG
GTCTCCGAAC TGAAATGGGA CAAGGCCGCC TGCCGCTTCT GCGGCACCGG CTGCAGCGTG
ATGGTGGCGA CGAAGGAAAA TCGCGTGGTC GCCACCCACG GCGACACCAA GTCCGAGGTC
AATCGCGGAC TGAACTGCGT GAAGGGCTAT TTCCTCTCCA AGATCATGTA CGGCCACGAC
CGGCTGACCC AGCCGATGCT GCGTAAGACC GACGGCAAAT ACGACAAGAA CGGCGAGTTC
ATGCCGGTGT CGTGGGACGA GGCCTTCGAC ATCATGGCGG AAAAATTCAA GGCGGCGCTG
AAGAAGCGCG GCCCGAGCGG CGTCGGCATG TTCGGCTCCG GGCAGTGGAC GGTGTGGGAA
GGCTACGCCG CGTCGAAACT GTTCAAGGCC GGCTTCCGCT CCAACAACAT CGATCCGAAT
GCCCGGCACT GCATGGCCTC GGCGGTCGCG GGCTTCATGC GCACCTTCGG CATCGACGAG
CCGATGGGCT GCTACGACGA CATCGAAGCC GCCGACGTGT TCGTGCTGTG GGGCTCCAAC
ATGGCGGAGA TGCATCCGCT GTTGTGGACC CGGGTCACCG ACCGAAGGCT GTCGGCGCCG
CACGTCAAGG TCGCGGTGCT GTCGACCTTC GAGCACCGCT CGTTCGACCT CGCCGATCTT
GGCCTGGTGT TCAAGCCGCA GACCGATCTG GCGATCCTCA ACGCCATCGC CAACCACATC
ATCAAGACCG GCCGGGTCAA CAAGGACTTC GTCGCCAAGC ACACCACCTT CAAGCGGGGC
CAGACCGATA TCGGCTACGG CCTGCGCCCC GAGCATCCGT TGCAGAAGGC CGCCACCGGC
GCCGCCAAGG CCAACGACGC CACCGATATG AGCTTCGAGG ACTACGCCGC CTTCGTCGCC
GACTACACCA TCGAGAAGGC GTCGCAGATT TCCGGCGTGC CGGCCGCCAA GATCGAGGCG
CTGGCCGAGC TCTATGCCGA CCCCAACACC AAGGTCACCA GCTTCTGGAC CATGGGCTTC
AATCAGCACA CCCGCGGCGT CTGGGCCAAT AACCTTGCCT ACAACCTGCA TCTGTTGACC
GGAAAAATCT CCGAGCCCGG CAACAGCCCG TTCTCGCTGA CCGGGCAGCC TTCGGCCTGC
GGCACCGCGC GCGAGGTCGG CACCTTCTCG CATCGGCTGC CGGCCGACAT GGTGGTGACC
AACAAGAAGC ATCGCGACAT CGCCGAAAAA ATCTGGAAGC TGCCGGAAGG CACCATTCCG
GACAAGCCCG GCTATCACGC CGTGCTGCAA AGCCGGATGC TGAAGGACGG CTTGCTCAAC
GCCTATTGGG TGCAGGTCAA CAACAACCTG CAGGCCGGCG CCAACGCCAA TGAAGAAACC
TATCCGGGCT TCCGCAATCC GGACAATTTC ATCGTCGTCT CCGACGCCTA TCCGTCGGTC
ACCGCGCTCG CCGCCGACCT GATCCTGCCG ACCGCGATGT GGGTGGAGAA GGAAGGCGCC
TATGGCAATG CCGAGCGCCG CACCCAGTTC TGGCATCAGC TGGTCAGCGC GCCGGGGCAG
GCTCGCTCCG ACCTGTGGCA GCTGATGGAA TTCGCCAAGC GCTTCAAGAT CGAAGAGGTG
TGGACCGAAG AGCTTTTGGC GAAGAAGCCG GAAGTTCGCG GCAAGACCAT GTACGACGTG
CTGTATCGCA ACGGCCAGGT CGACAAGTAT CCCTCGTCCG ATATCGAGGC CGGCTATCTC
AACGACGAAT CCAAGGCGTT CGGCTACTAC GTGCAGAAGG GGCTGTTCGA GGAATACGCC
TCGTTCGGCC GCGGCCATGG CCACGACCTG GCGCCGTTCG ACGACTACCA CCGCGAGCGC
GGCTTGCGCT GGCCGGTGGT GAACGGCCAG GAGACCCGCT GGCGATTCCG CGAGGGCTCC
GACCCTTACG TCCAGCAGGG CGCCGGCGTG CAGTTCTACG GCTTCCCGGA CGGCCGCGCG
AGAATCTTTG CGCTGCCCTA CGAGCCCGCG GCGGAAGCTC CCGACGCCGA ATTTCCGTTC
TGGCTCTCCA CCGGCCGCGT GCTGGAGCAT TGGCACTCCG GCACCATGAC GCGGCGCGTT
CCCGAACTCT ACAAGGCGTT CCCCGAAGCG GTCTGCTTCA TGCATCCGGA CGACGCCGCC
GAGCTCAAGC TGCGCCGTGG CGACGAGATC AAGGTGGAGT CGCGCCGCGG CTTCATCCGT
ACCCGGGTCG AGACCCGTGG CCGCAACAAG CCGCCGCGCG GGCTGGTGTT CGTGCCGTGG
TTCGACGAAG CGCAACTGAT CAACAAGGTG ACGCTGGACG CCACCGATCC GATCTCGCTG
CAGACCGACT ACAAGAAATG CGCGGTGCGC ATCGAACGGG TGACCGCGTC ATGA
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| Protein sequence | MTTPKLDRRQ VLKLEAAAMA ALAGGIAMPA AAANLVTERA VSELKWDKAA CRFCGTGCSV
MVATKENRVV ATHGDTKSEV NRGLNCVKGY FLSKIMYGHD RLTQPMLRKT DGKYDKNGEF
MPVSWDEAFD IMAEKFKAAL KKRGPSGVGM FGSGQWTVWE GYAASKLFKA GFRSNNIDPN
ARHCMASAVA GFMRTFGIDE PMGCYDDIEA ADVFVLWGSN MAEMHPLLWT RVTDRRLSAP
HVKVAVLSTF EHRSFDLADL GLVFKPQTDL AILNAIANHI IKTGRVNKDF VAKHTTFKRG
QTDIGYGLRP EHPLQKAATG AAKANDATDM SFEDYAAFVA DYTIEKASQI SGVPAAKIEA
LAELYADPNT KVTSFWTMGF NQHTRGVWAN NLAYNLHLLT GKISEPGNSP FSLTGQPSAC
GTAREVGTFS HRLPADMVVT NKKHRDIAEK IWKLPEGTIP DKPGYHAVLQ SRMLKDGLLN
AYWVQVNNNL QAGANANEET YPGFRNPDNF IVVSDAYPSV TALAADLILP TAMWVEKEGA
YGNAERRTQF WHQLVSAPGQ ARSDLWQLME FAKRFKIEEV WTEELLAKKP EVRGKTMYDV
LYRNGQVDKY PSSDIEAGYL NDESKAFGYY VQKGLFEEYA SFGRGHGHDL APFDDYHRER
GLRWPVVNGQ ETRWRFREGS DPYVQQGAGV QFYGFPDGRA RIFALPYEPA AEAPDAEFPF
WLSTGRVLEH WHSGTMTRRV PELYKAFPEA VCFMHPDDAA ELKLRRGDEI KVESRRGFIR
TRVETRGRNK PPRGLVFVPW FDEAQLINKV TLDATDPISL QTDYKKCAVR IERVTAS
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