| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0945 |
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| Symbol | |
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| ID | 3969747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1040904 |
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| End bp | 1042283 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637924061 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_530834 |
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| Protein GI | 90422464 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.540348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTTC TCATCGTTGG CACCTTGAAG GGTCAGCTCA CGACCGCCAC CAAGATCGCC
ATGGACAACG GCGCCTCGGT GACGCATTCG GAAAACAACG AGCAGGCGAT GCGGGTGCTG
CGCGGCGGCA AGGGCGCCGA CCTGCTGTTG GTCGACGTCG CGCTGGACAT CCGCGACCTG
GTGATGCGGC TCGAGGCCGA GCACATCCAC GTGCCGATCG TGGCCTGCGG CATCGCCAAC
GACGCCCGCG CCGCGGTCGC CGCGATCCAC GCCGGCGCCA AGGAATACAT CCCGCTGCCG
CCGGATCCGG AACTGATCGC CGCGGTGCTG GCCGCGGTGG CCAACGATTC CCGCGAGCTG
ATCTATCGCG ACGACGCGAT GGCCAAGGTG ATCAAGCTGG CGCAGCAGAT CGCCGGCTCC
GACGCTTCGG TGATGATTAC CGGCGAGAGC GGCACCGGCA AGGAAGTGCT GGCGCGCTAC
GTGCACAGCC GCTCCAACCG TGCCAAGAAG CCGTTCATCA GCATCAACTG CGCGGCGATC
CCCGAGCATC TGTTGGAATC CGAATTGTTC GGCCACGAGA AGGGCGCCTT CACGGGTGCT
GTGGCGCGGC GCATCGGCAA GTTCGAAGAG GCCACCGGCG GCACGCTGTT GCTCGACGAA
ATTTCCGAAA TGGACGTTCG GCTGCAATCC AAATTGCTGC GCGCGATCCA GGAGCGAGTG
ATCGACCGCG TCGGTGGCAC CCGCCCGGTG CCGATCGACA TCCGCATTAT CGCCACCTCG
AACCGCAATC TCGCCGACGT GGTGCGCGAA GGCACCTTCC GCGAAGATTT GTTGTTCCGG
CTCAACGTCG TCAACCTGAA GATCCCGCCG TTGCGCGAGC GTCCGGCGGA CATTCTCGAA
CTGGCGCAGC ATTTCGCCAA GAAATACGCC GACGCCAACG GCGTGGCGCT GCGGCCGATC
TCGGCGGAGG CGCGCCGCGT GTTGAGCAGC AACCGCTGGC AGGGCAACGT CCGCGAATTG
GAAAACACCA TCCATCGCGC GGTGCTGATG GCGCAGGGCG ACGAGATCGG GCCCGAGGCG
ATCATTTCGC CGGATGGCGA TCGGCTCGAC CTGCCGAAGA CCGCGCCGGC GGTGGCGCAC
GCCACGCTCG CCGCCGAGCA GGTGACCCGG GCGCTGGTCG GCCGCACCGT CGCCGACGTC
GAGCGCGATC TGATTTTGGA GACGCTGAAG CATTGCCTCG GCAACCGCAC CCATGCGGCC
AACATTCTCG GCATCTCGAT CCGCACGCTG CGCAACAAGT TGAACGAATA CGCCGACGGC
GGCTTGCCGG TGACGCCGGC CGGCTCCGGC GAATTCCGCG CCTTCGTGGC GACGGCGTAA
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| Protein sequence | MRLLIVGTLK GQLTTATKIA MDNGASVTHS ENNEQAMRVL RGGKGADLLL VDVALDIRDL
VMRLEAEHIH VPIVACGIAN DARAAVAAIH AGAKEYIPLP PDPELIAAVL AAVANDSREL
IYRDDAMAKV IKLAQQIAGS DASVMITGES GTGKEVLARY VHSRSNRAKK PFISINCAAI
PEHLLESELF GHEKGAFTGA VARRIGKFEE ATGGTLLLDE ISEMDVRLQS KLLRAIQERV
IDRVGGTRPV PIDIRIIATS NRNLADVVRE GTFREDLLFR LNVVNLKIPP LRERPADILE
LAQHFAKKYA DANGVALRPI SAEARRVLSS NRWQGNVREL ENTIHRAVLM AQGDEIGPEA
IISPDGDRLD LPKTAPAVAH ATLAAEQVTR ALVGRTVADV ERDLILETLK HCLGNRTHAA
NILGISIRTL RNKLNEYADG GLPVTPAGSG EFRAFVATA
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