Gene RPC_0936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0936 
Symbol 
ID3969738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1033944 
End bp1034795 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content70% 
IMG OID637924052 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_530825 
Protein GI90422455 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG TTCAAGACGC GCCGGTCGAT GACTCCGAAT TCCGGCCGAT CACGGCCCGA 
TCGCCGGCCC GGTCGGCGCG GCTTCGCCGC GGCGGCGCAA CGTTGCTGGC ATTGGTCGCG
GCGGGCCTGC CGACCCTGGC GTCGGCCGCC GCGGATCTCG CCGCGCTGCC GCGCAACCTG
TCGCCATGGG GCATGTTCCA GAACGCCGAT ATCGTCGTCA AAGTGGTGAT GGTCGGGCTG
GCGCTGGCCT CGCTGGCGAC CTGGACGGTG TGGCTGTCGA AGACCCTGGA ATTGCGCCGC
GAAACCGAAC GTGCGCTGCA GCGTCTGGCG CTGTTGGAGA GCGACACGCC GCTGCGCGAC
ATCGAACAGG ATTGTACGGA TGCGAACGAT GCGGTGGCGC AGCTGATCCT GTCGGCGTCG
CGCGAGGCCA GCCTGTCGGG CGGGGTGTTC GACGACGCCT TCAAGGAGCG CGTGGCGTTG
CGGCTGGAGC GGGTCGAGGG CGCGATGTCG CGGCGGATCG CCCGCGGCAC CGGCATTCTG
GCGACGATCG GCGCCACCTC GCCGTTCATC GGGCTGTTCG GCACGGTGTG GGGCATCATG
AACGCCTTCA TCGGCATTTC GCAGGCGCAC ACCACCAATC TCGCGGTGGT GGCGCCGGGC
ATCGCCGAGG CGCTGCTGGC CACCGCGCTG GGCCTCGTTG CCGCGATCCC CGCGGTGGTG
ATCTACAATC ATCTGGCGCG GGTGATCGCC GGCTATCGGG CGTTGCTCGG CGATGCCTCG
GCGCAGTTAT TGCTGCTGCT CAGCCGCGAC AAGGGCCGCC GCGGCGCGCG GCTCGGACGG
GCGGCGGAGT AG
 
Protein sequence
MRIVQDAPVD DSEFRPITAR SPARSARLRR GGATLLALVA AGLPTLASAA ADLAALPRNL 
SPWGMFQNAD IVVKVVMVGL ALASLATWTV WLSKTLELRR ETERALQRLA LLESDTPLRD
IEQDCTDAND AVAQLILSAS REASLSGGVF DDAFKERVAL RLERVEGAMS RRIARGTGIL
ATIGATSPFI GLFGTVWGIM NAFIGISQAH TTNLAVVAPG IAEALLATAL GLVAAIPAVV
IYNHLARVIA GYRALLGDAS AQLLLLLSRD KGRRGARLGR AAE