| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0932 |
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| Symbol | |
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| ID | 3969734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1029622 |
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| End bp | 1031073 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637924048 |
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| Product | hydrogenase 4 subunit F |
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| Protein accession | YP_530821 |
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| Protein GI | 90422451 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.187708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC CCGGGTTCAA TCCGGTGCTC GGCGTGGTGC TGATCCCGAT CTTTGCCGCG
GCGCTGCTGG CGGCGTTGCC CGGCTATCGG CTGACCGCGC GGCTCAACGT GGTGGCTTGC
CTGGCCACCT TCGTCTGCGC GGTGTCGTTG CTGATCCTGC CGCGGCCGAC GCCGGGACCC
TATGTGCTGG TCGACGACCT CAACATCGTG TTCATCGTGC TGAATTCGTT CGTCGGGCTG
ACCACCAGCC TGTTCAGCGC CAGCTACATC GCCCACGAGT TGGAGACCGG CCGGCTGACC
CCGGCTTACC TGCGGTTCTA CCACGCGATG TACCAGACCA TGATGTTCGG CATGAATCTG
GCGTTCATGT CGAACAATAT CGGCCTGATG TGGGTGGCGG TCGAAGTCGC GACGCTGACC
ACGGTGCTGA TGGTCGGCAT CTATCGCACC GAGGCGGCGC TGGAAGCCGC CTGGAAATAT
TTCATCCTCG GCAGCGTCGG CATCGCCTTT GCGCTGTTCG GCACCATCCT GGTCTATATG
GCGGCGCGCC CGATCATCGG CGAGGGCCAG GACGCCATGA TCTGGACGCT GCTGATCGAG
CGCGCCTCGC AGTTCGATCC CGCCTTGCTC AACGTCGCCT TCGTGTTCCT GTTTCTCGGC
TACGGCACCA AGGTCGGGCT GGCGCCACTG CACGCCTGGC TGCCGGACGC CCACGCCGAG
GGTCCGACGC CGATCTCCGC GGTGCTGTCC GGGCTGTTGT TGAACGTGGC GCTGTACGCG
CTGCTGCGCT TCAAGATGCT GATGACCGCC AATCCCGAGG CGATGGCGCC GGGCACGCTG
ATGGTGACGA TGGGGCTTAC GTCGCTGATC TTCGCCGCCT TCATGCTGTA CCGCCGCCGC
GACATCAAAC GGCTGTTCGC CTATTCGTCG ATCGAGCACA TGGGCATCAT CGTGTTCGCG
TTCGGGATGG GCGGGCCGCT GGCGAATTTC GCAGGTCTCT TGCACATGGT GATGCACAGC
CTGACCAAGT CGGCGATCTT CTTCGCGGTC GGCCACATCG CGCAGATCAA GGGCACCCAG
ACCATCGATG AAATCCGCGG CATCACCGAG AGCCATCCGG CGCTGGGCTG GGGTTTCGTC
GCCGGCGTGG TGGCGATCGC CGGGCTGCCG CCGCTCGGCA TCTTCATGAG CGAGTTTCTG
GTGGTGAGTT CGACCTTCGC GCGGCAGCCG CTGTTGGCGC TGCTGTTGGT GTTCGGGCTG
TTGGTGGCGT TCGGCGCGCT GACGCTGCGG CTGACCGGCG TCGCCTTCGG CGAGCCGCGC
GGCAGTACGC AGCCCGCCGA GGCGTCGTAT CTGCCGATGT TCGCCCATCT GGTGCTGGTA
TTGGTCGCCG GCGTGTATCT GCCGGCGCCG ATCGTGGTCT GGTTCCAGCA TGTCGCCCAC
CTTCTCGGAT AA
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| Protein sequence | MTLPGFNPVL GVVLIPIFAA ALLAALPGYR LTARLNVVAC LATFVCAVSL LILPRPTPGP
YVLVDDLNIV FIVLNSFVGL TTSLFSASYI AHELETGRLT PAYLRFYHAM YQTMMFGMNL
AFMSNNIGLM WVAVEVATLT TVLMVGIYRT EAALEAAWKY FILGSVGIAF ALFGTILVYM
AARPIIGEGQ DAMIWTLLIE RASQFDPALL NVAFVFLFLG YGTKVGLAPL HAWLPDAHAE
GPTPISAVLS GLLLNVALYA LLRFKMLMTA NPEAMAPGTL MVTMGLTSLI FAAFMLYRRR
DIKRLFAYSS IEHMGIIVFA FGMGGPLANF AGLLHMVMHS LTKSAIFFAV GHIAQIKGTQ
TIDEIRGITE SHPALGWGFV AGVVAIAGLP PLGIFMSEFL VVSSTFARQP LLALLLVFGL
LVAFGALTLR LTGVAFGEPR GSTQPAEASY LPMFAHLVLV LVAGVYLPAP IVVWFQHVAH
LLG
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