| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0925 |
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| Symbol | |
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| ID | 3969766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1021769 |
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| End bp | 1023841 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637924041 |
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| Product | cytochrome c1 |
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| Protein accession | YP_530814 |
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| Protein GI | 90422444 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex
[COG2857] Cytochrome c1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAC CTTCGACCTA TCAGCCACGT CCCGGCGTCA TGAAGTGGCT GGAAGACCGC
CTGCCGATCG TGAGCTTCGT TCATTCTTCC TTCGTGTCGT GGCCGACGCC GCGCAACCTG
AACTATTGGT GGACGTTCGG CGCCATCCTG TCGATGATGC TGGTGGTTCA GATCGTCACC
GGCATCGTGC TGGCGATGCA TTACGTGCCG CACGCCGATA TGGCCTTCGA TTCCGTCGAG
TCGATCGTCC GCGACGTCAA TTACGGCTGG CTGTTGCGTA ACGTTCACGC CGCCGGCGCC
TCGATGTTCT TCATCGCGGT CTACGTCCAC ATGTTCCGCG GCCTGTATTA CGGGTCATAC
AAGGAGCCGC GCGAGGTGCT GTGGATCCTC GGCGTGATCA TCTATTTGCT GATGATGGCC
ACCGGCTTCA TGGGCTACGT GCTGCCCTGG GGGCAGATGA GCTTCTGGGG TGCCACCGTC
ATCACCAACC TGTTCTCGGC CATTCCGTTG GTCGGCGACA GCATCGTGAC GTTGCTGTGG
GGCGGCTATT CGGTCGGCAG TCCGACGCTG AACCGGTTCT TCTCGCTGCA CTACCTGCTG
CCTTTCGTGA TCATCGGCGT GGTCGTGCTG CACATCTGGG CGGTTCACGT CACCGGCCAG
AACAACCCGA CCGGCGTCGA ACCGAAGACC GATAAGGACA CCGTGCCGTT CACGCCCTAT
GCGACGATGA AGGACTTGTA CGCCGCCTCG GTATTCCTGA TCTTCTTCGC CTGGTTCATC
TTCTACATGC CGAACTATCT CGGCGAGGCC GATAACTACA TCCCGGCCAA TCCCGGCGTG
ACCCCGCCGC ACATCGTGCC GGAATGGTAT TACCTGCCGT TCTACGCGAT CCTGCGCTCG
ATCCCGAACA AGCTGTTGGG CGTCGTGGCG ATGTTCGGTG CGATCATCGT GCTGCTGTTC
CTGCCCTGGC TGGACAGCAT GAAGGTGCGG TCGTCGCGCT ATCGTCCGCT CGCCAAGCGC
TTCTTCTGGG CCTTCGTGGT GGTCTGCATC CTGCTCGGCT GGCTCGGCGG CCAGGCGGCG
GAAGGCATCT ACACCGTCAT GGCCCGCATC CTGACCGCGG CCTACTTCGC CTACTTCCTG
GTGGTGTTGC CGATGCTGTC GCGCATGGAA AAGACCCTGC CGCTGCCGAA CTCGATTTCG
GAGGACGTGC TGGCGAAGTC CGACGGCGCC GGCAAGGCCG TGGCCTCGAT CGCGATGGTG
CTGGGTCTGG CGGGCGCGCT GGTGATGGGC GGTGCCCAAA GCGCCAAAGC GGCCGGCGGA
GAAAATATCC CGGCGTCGCT GGAATGGTCG TTCGCGGGTC CGTTCGGCAA GTTCGACCGC
GCCCAGCTGC AGCGCGGCTA CCAGGTCTAC AAGGAGGTCT GCGCGACCTG TCACTCGATG
AAGTACGTCC ACTACCGCAA CCTGGCGGAG CCGGGTGGAC CGGGCTTCAC CGTCGAGCAG
GCCAAGGCGT TCGCCGCCGA AGCCACCATC AAGGACGGCC CGAACGATTC CGGCGAAATG
TACGATCGCC CGCGCCGGCT CGCCGACCCG TTCCCGTCGC CCTATGCGAA CGAGCAGGCC
GCACGCTTTG CCAATGGCGG CGGCGTGCCA CCGGACCTCT CCCTGGTCGC CAAGGCGCGG
TCCTATGAGC GCGGCTTCCC GCAGTTCCTG TTCGATCTGT TCACCCAGTT CCAGGAGCAG
GGCCCGAACT ACGTGGCGGC GCTGCTGCGC GGCTACGAAG AGACTCCGCC CGAGGGCTTC
ACGCTTCCCG ACGGCTCCTA TTACAACAGG TACTTCCCCG GCCACACGAT CAAGATGCCG
ATGATGCTGA TGGATGGCGT GGTCAGCTAT CAAGATGACA CGCCGCAGAC GGCCGATCAG
TACGCCAAGG ACGTCACTGC CTTCCTGATG TGGGCGGCGG AGCCGCACCT CGAGGCCCGC
AAGCGAATGG GCTTGCAGGT GATGATCTTC CTGTTGATCC TGTCCGGCCT GTTGTACTTC
ACCAAACAGC GGATCTGGGC CGACGCGCAC TAA
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| Protein sequence | MSGPSTYQPR PGVMKWLEDR LPIVSFVHSS FVSWPTPRNL NYWWTFGAIL SMMLVVQIVT
GIVLAMHYVP HADMAFDSVE SIVRDVNYGW LLRNVHAAGA SMFFIAVYVH MFRGLYYGSY
KEPREVLWIL GVIIYLLMMA TGFMGYVLPW GQMSFWGATV ITNLFSAIPL VGDSIVTLLW
GGYSVGSPTL NRFFSLHYLL PFVIIGVVVL HIWAVHVTGQ NNPTGVEPKT DKDTVPFTPY
ATMKDLYAAS VFLIFFAWFI FYMPNYLGEA DNYIPANPGV TPPHIVPEWY YLPFYAILRS
IPNKLLGVVA MFGAIIVLLF LPWLDSMKVR SSRYRPLAKR FFWAFVVVCI LLGWLGGQAA
EGIYTVMARI LTAAYFAYFL VVLPMLSRME KTLPLPNSIS EDVLAKSDGA GKAVASIAMV
LGLAGALVMG GAQSAKAAGG ENIPASLEWS FAGPFGKFDR AQLQRGYQVY KEVCATCHSM
KYVHYRNLAE PGGPGFTVEQ AKAFAAEATI KDGPNDSGEM YDRPRRLADP FPSPYANEQA
ARFANGGGVP PDLSLVAKAR SYERGFPQFL FDLFTQFQEQ GPNYVAALLR GYEETPPEGF
TLPDGSYYNR YFPGHTIKMP MMLMDGVVSY QDDTPQTADQ YAKDVTAFLM WAAEPHLEAR
KRMGLQVMIF LLILSGLLYF TKQRIWADAH
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