Gene RPC_0917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0917 
Symbol 
ID3969758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1016377 
End bp1016979 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content65% 
IMG OID637924033 
Producthypothetical protein 
Protein accessionYP_530806 
Protein GI90422436 
COG category[S] Function unknown 
COG ID[COG3816] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.874284 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGC AAGGGCAGAG CCCGATTCAA AATCTCGACG GCTTGGTTGC GGCGGCGACC 
GGCGTCGGCC AATCGGCCAA AGGTCTGCCG CCGGTGCATC TGTGGAACCC GCCGTTCTGC
GGTGACCTGG ATATGCGAAT CGCCAGCGAC GGCACTTGGT TTTATCTCGG CACGCCGATC
GGCCGGCCGG CGCTGGTGCG ATTGTTCTCG ACGATTCTGA AGCGCGAGGA CGGCAAGCAC
TTTCTCGTGA CGCCGGTGGA AAAGGTCGGC ATCCAGGTCG ACGACGCGCC GTTCCTTGCC
GTCGAGATGG TCAAGGACGC CGGCGCCGAT GGCCCGCTGC TGCGGTTTCG CACCAATGTC
GACGACTGGG TGCCGTGCGA CCGGGAGCAT CGGCTGCGGT TCGAAGTCGC AGCCGACGGC
GGGCTGATGC CGTATCTGCA CGTCCGCGCC GAGTTGTGGG CTAAGGTGAC CCGCGCGCTG
TATTACGATC TGGTTGACAT TGGCGAGGAG CGGGTGGTCG ATGGCCGTGC GATGTTTGGG
ATTGCTTCCG GCGGCGCGTA TTTTGCGATG GCCGACGCGG AGCAGGTGAG GGGAGCGCTT
TGA
 
Protein sequence
MAKQGQSPIQ NLDGLVAAAT GVGQSAKGLP PVHLWNPPFC GDLDMRIASD GTWFYLGTPI 
GRPALVRLFS TILKREDGKH FLVTPVEKVG IQVDDAPFLA VEMVKDAGAD GPLLRFRTNV
DDWVPCDREH RLRFEVAADG GLMPYLHVRA ELWAKVTRAL YYDLVDIGEE RVVDGRAMFG
IASGGAYFAM ADAEQVRGAL