| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0906 |
|---|
| Symbol | |
|---|
| ID | 3969786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1002836 |
|---|
| End bp | 1003402 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637924022 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530795 |
|---|
| Protein GI | 90422425 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.273789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGG TGGGCGGACG GCTGAAGGGG CGCAACATCG CGTCGCCGAC ATCGCGCGAC
ATCCGGCCGA CGCAGGACCG CCTGCGCGAG TCGCTGTTCA ACATCCTGAT GCACGCCTAC
GGCAATCCGA TGCTGGATGC CCGCGTGCTC GACCTGTTCG CCGGCACCGG CGCGCTTGGC
ATCGAGGCGG TGTCGCGCGG CGCCAAATTC GCGCTGTTCG TCGACAACGG CGCCGAGGCT
AGAGCGCTGC TGCGCAACAA CGTCGAGGCG CTGGGCCTCG GCGGCGTCAC CAAGGTCTAT
CGCCGCGACG CCGGCAATCT CGGCCCGGCG CATCCGGTCG AACCGTTCGC GCTGGTGTTC
TGCGATCCGC CCTACCGCAT GAAGCTCGCC GAGAAGGCGC TGATCTCACT GCGCGACGGC
TGCTGGCTGA TCCCGGACGC GCTGGTGGTG GTCGAAGAGG CCAAGGACGC GGCGTTCGCG
GCGCCCGCCG GCTTCGACGA ACTCGAACGC CGCGCTTATG ACGACACCGA ATTCACGCTG
CTGCGGTTCG GGGCGAAAGC GGTCTGA
|
|---|
| Protein sequence | MRVVGGRLKG RNIASPTSRD IRPTQDRLRE SLFNILMHAY GNPMLDARVL DLFAGTGALG
IEAVSRGAKF ALFVDNGAEA RALLRNNVEA LGLGGVTKVY RRDAGNLGPA HPVEPFALVF
CDPPYRMKLA EKALISLRDG CWLIPDALVV VEEAKDAAFA APAGFDELER RAYDDTEFTL
LRFGAKAV
|
|---|
| |