| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0895 |
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| Symbol | |
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| ID | 3969775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 992023 |
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| End bp | 993480 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924011 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_530784 |
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| Protein GI | 90422414 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.236507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTA TTTCCACGAT ATTCATCGCC ATCTGCATGG TGCTGGTCTC CGCCTCGCTG
GGCATGGTGC TGTATTCGAT GGCCCGGTTC AGCTTCGGCG AATCGGCGTT GGTGGCGATG
ACCACGCTGA CCTTTCTGGT GCTGTACAAC GCGGTGGCGA TGCGGCTGCG CGACCGCAGC
GACGTCTCCG GCCAGGTCGC CGATCTGTCG CGCGGCATCG GCGATCTGGC GCGGCAAGTC
GCCGAATTCG GCCGAAGGCT GTCCGCCCTC GAGGGCCGGG CGCCGGGCGC CGCCGCCGGT
CACGGCCCGG ACCAGACCCA GATCGTGCGC GACGAAATCA GCGAACTCGG CGCCATGGTC
AAGCAATTGG CCAACACCGT CGCCAGCCAT GAGGACCTGC TGGCGGCGGC GTCAGCGCCG
GCCGCGCCGG TGGCGCGACG GATGGAGGCG CCGCCGATCG TGGTGCCGCC GCGTGACGGC
GAGCCGGTCA GCGTCCAGAT CGCCCCCACG GTGATCGCCG CGCCGGTCGG CGAGCCCGCC
GCGCTGCAGC CGCCGCCGCT GCGCAGCGAG GCGCAACTCG CGATCGCGGT GCGAAACGCC
ATCGAGGCCA ATCGCGTCGA CATCTATCTG CAGCCGATCG TCTCGCTGCC GCAGCGCAAG
GTGCGGTTCT ACGAGGCGGT GACGCGGCTG CGCGACGACA GCGACAAGGT GCTGACCGCC
GACGAGTTCA TCCCCGCCGC GGAATCCGCG CAGCTGATGG GCAAGATCGA CCACGCTTTG
CTGCTGCGCT GCATGCAGGT GCTGCGCCGG CTGATGGTGC GCAACAAGGA GGTCGGGGTG
TTTTGCAACA TCGCCGCCTC GACGCTGGCC AACGCCGACA CCTTCGGCCA ATGCCTGGAA
TTTCTCGAGG CCAACCGCGC GCTGGCCGGC TCCTTCATCA TCGAGTTCAA GCAGGACGCG
TTCCGCAATC TCGGGCCGAT GGAGATCGAA CATGTCGCAG CATTGGCGCA GCGCGGCTAT
CGCTTCTCGA TCGACCACGT CACCGACCTG CGGTTCGATC CGCGCGATAT GGCCGATCGC
GGCGTGCGCT TCATCAAGGT GCCTGCGGCG TTGATGCTGC AGAACGAAGC GCCGTCGGCC
AACATCCATC CGGCGGATCT GTGCGATCTG CTCGGCCGCT TCGGCATCGA TCTGATCGCC
GAGCGGATCG AGGGCGAACG CGCGGTGGTC GACCTGTTGG ATTTCGACGT CCGGTTCGGC
CAGGGCTTCC TGTTCGCCGC ACCCCGCCCG CTGCGGCCGG ACGCCGCCAC CAACGGCCAT
GCGGCGGTCG CGCCGAACCA CGACCAACGG GCAAGTCATG ACAGCACCAA GGCCTCACGC
ACCGAGATCG GCCGGATCGA TCCCAAGCGC GTCACCGGCA ACGCCGCGCT GGTGCGCCGC
TCCGCCAGCC CGAACTGA
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| Protein sequence | MIRISTIFIA ICMVLVSASL GMVLYSMARF SFGESALVAM TTLTFLVLYN AVAMRLRDRS
DVSGQVADLS RGIGDLARQV AEFGRRLSAL EGRAPGAAAG HGPDQTQIVR DEISELGAMV
KQLANTVASH EDLLAAASAP AAPVARRMEA PPIVVPPRDG EPVSVQIAPT VIAAPVGEPA
ALQPPPLRSE AQLAIAVRNA IEANRVDIYL QPIVSLPQRK VRFYEAVTRL RDDSDKVLTA
DEFIPAAESA QLMGKIDHAL LLRCMQVLRR LMVRNKEVGV FCNIAASTLA NADTFGQCLE
FLEANRALAG SFIIEFKQDA FRNLGPMEIE HVAALAQRGY RFSIDHVTDL RFDPRDMADR
GVRFIKVPAA LMLQNEAPSA NIHPADLCDL LGRFGIDLIA ERIEGERAVV DLLDFDVRFG
QGFLFAAPRP LRPDAATNGH AAVAPNHDQR ASHDSTKASR TEIGRIDPKR VTGNAALVRR
SASPN
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