| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0892 |
|---|
| Symbol | |
|---|
| ID | 3969772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 986662 |
|---|
| End bp | 987927 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924008 |
|---|
| Product | fumarylacetoacetase |
|---|
| Protein accession | YP_530781 |
|---|
| Protein GI | 90422411 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCCA ACGATCCCAG CCTGCGCGCG TTCGTCGAGG TCGACCCGCG CTCGGACTTT
CCGATCCAGA ACCTGCCCTA CGGGGTGTTC TCGACGCCGT CGCAACCGGC GCCGCGGATC
GGCGTCGCGA TCGGCGAATA TGTGCTCGAT CTCGCCGCAC TGGCGGACGC GGGGCTGCTC
GACGTGCCCG GCGACAACGT GTTCGCGCAA GGCGCGGTCA ACGGCTTTAT GGCGCTCGGC
GGCGAGGTTT GGTCGGCGAC ACGGGCGCGG ATCAGCGAAG TGCTGCGCGC CGACAATCCG
CAACTGCGCG ATGACGCGGC GCTGCGCGCC CGCGCGCTGG TCGCGCAGCA CGAGGTGACG
CTGCATCTGC CGCTCGAGGT CGCGGGCTTC ACCGATTTCT ATTCGTCGAA AGAACATGCC
AGCAATGTCG GCGCGCTGTT TCGCGACAAC GCCGATCCGC TGTTGCCGAA CTGGCTGCAC
ATTCCGATCG GTTACAACGG CCGCGCCTCG ACCGTCATGG TCTCCGGCAC CGAGATCCGC
CGGCCGCACG GGCAGTTGAA GGAGCCGGGC GACGCCGGCC CGCGCTTTGC GCCGAGCCGG
CGGCTGGATT TCGAACTCGA GATCGGCGTG GTGATCGGGC AGCGCTCGGC GCTTGGTGAG
CGGCTCAGCG AAGCGCAGGC CGAGGCGATG ATCTTCGGCT TCGTGCTGCT CAACGATTGG
AGCGCGCGCG ACATCCAGCA ATGGGAATAC GTGCCGCTCG GCCCGTTCCA GGGCAAGGCG
TTCGCCACCT CGATCAGCCC GTGGATCGTG ACCCGGGAAG CGCTGCAGCC GTTCCGGGTG
CAGGGGCCGG CGCAGCAGCC AGCGCCGCTG GACTATCTGG CGCAGCGCGG GCCGAACAAC
TACGACTTGG CGCTTGAAGT CGATTTGCGC ACGGCGGCGA CCGCGCCGGC GACGATCTGC
GCTACCAATT TCAAGTTTAT GTATTGGTCG TCGGTGCAGC AGCTGATGCA CCATGCGTCC
AGCGGCTGCG CGATGCGGGT CGGCGATCTG CTCGGCTCCG GCACCGTCAG CGGCCCGGGG
CCGGGACAGC GCGGCAGCCT GCTGGAGATT TCATCGAACG GCGCCGAGCC GTTGACGCTG
CCCGGCGGCG AGCGGCGCGG CTTTCTCGAA GACGGCGATT CGGTGAGCCA GCGCGGCTGG
TGCCAGGGCG ACGGCTACCG GGTCGGCTTC GGCGCGGTGG AAGGCACGGT ATTGCCGGCG
AAGTAA
|
|---|
| Protein sequence | MHPNDPSLRA FVEVDPRSDF PIQNLPYGVF STPSQPAPRI GVAIGEYVLD LAALADAGLL
DVPGDNVFAQ GAVNGFMALG GEVWSATRAR ISEVLRADNP QLRDDAALRA RALVAQHEVT
LHLPLEVAGF TDFYSSKEHA SNVGALFRDN ADPLLPNWLH IPIGYNGRAS TVMVSGTEIR
RPHGQLKEPG DAGPRFAPSR RLDFELEIGV VIGQRSALGE RLSEAQAEAM IFGFVLLNDW
SARDIQQWEY VPLGPFQGKA FATSISPWIV TREALQPFRV QGPAQQPAPL DYLAQRGPNN
YDLALEVDLR TAATAPATIC ATNFKFMYWS SVQQLMHHAS SGCAMRVGDL LGSGTVSGPG
PGQRGSLLEI SSNGAEPLTL PGGERRGFLE DGDSVSQRGW CQGDGYRVGF GAVEGTVLPA
K
|
|---|
| |