| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0887 |
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| Symbol | |
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| ID | 3969806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 980600 |
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| End bp | 982114 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637924003 |
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| Product | peptidase C14, caspase catalytic subunit p20 |
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| Protein accession | YP_530776 |
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| Protein GI | 90422406 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.389457 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTTG CGTCAAGTAA GCTCACCGCG CCGCAAGTCC GTTCGGCGCA AATCACCTTG
GACCCGCGTC GAATGACAAT CCGCCTGGCA TTGATTGCGA TCCTGAGCCT GGCGATGTCG
CCGCTGATCG AGGCCGCCGC GGCGGCCGAG CGGGTCGCGC TGGTGATCGG CAACGCGAAA
TATCCCGACA GCGAAAAGCC GCTCAAGGAA CCGATCAACG ATGCCCGCGA ACTCGGCGAG
GAATTGCAGC GCGCCGGCTT CGACGTCGAG ATCGGCGAGA ATTTGAACGG CGAGGCGATG
CGCCGCGCCT TCGACCGGCT CTATGCGAGG GTCGAGCCGG GCGCGGTGGC GCTGGTGTTT
TTCAGCGGCT TCGGCATCCA GTCGAACCGG CAGAGCTACC TGATCCCGGT CGACGCGCAG
ATCTGGACCG AGCCCGACGT ACGCCGCGAC GGCGTCAGCC TGGAAACCGT GCTCGGCGAA
ATCAACAGCC GCGGCGCCGC CATCAAGGTG GCGCTGCTCG ACGCCTCGCG GCGCAACCCG
TTCGAGCGCA GGTTCCGCAG CTTCTCCGCC GGACTCGCGC CGGTGGTCGC CCCGAACGGC
AGCCTGGTGA TGTATTCGGC GGCGCTGAGT TCGGTGGTCA GCGACAATGG CGGCGACCAC
GGCCTGTTCG TCGGCGAATT GGTGAAGGCG CTGCGCGACC CGGGTTCGAG CGTCGAGGAC
ACGCTGAGCC GCACCCGGCT CGGCATCACC CGCGCCTCGA AAAACGAACA GGTGCCGTGG
ATCTCGTCGT CGCTGACCGA CGAATTCTCC TTGAGCCCGG GGCCGCAGCC GACTGTGGCG
CTGAACGCGC CGCCGCCGAC CGGCGCAGCG CCCACCGCGG CGCCGGCGCT GCCCGCGCCG
ATCGAGATCG CCAAGCCGAA TCCGGCCGCC GCCGCGCCGC AAGCCGCGGC CAAGCCGGCG
GAGCCGAACC TTGCCGCGCC GGAGCCTGCA AAAGCGCCGG CGAGCCAACT GGCGCTGGCC
GAGGATCCCA CCATCAAGGC GTTGAGCGGC AAGCTCGCCG ACAATCCGGA CGACGCCAAC
GCGCTGTATC GCCGCGGCCA GGTCTATGCC AGCAGGGGCG CCTACGCGCT CGCGGTGCAG
GACTTCGACG CCACCATCCG GCTCAACCCG CGCGACGTCG AGGCTTACAA CAATCGCTGC
TGGGTGCGAA CCGTGACCGG CGACCTGACA GCCGCGCTGA AGGATTGCAA CGAGGCGCTG
CGGCTGCGGC CGAACTTCGC CGACGCGCTG GACAGCCGCG GGCTGGTCAA CCTGAAGAAC
GGCCAGATCA AGAACGCGAT TGCCGATTTC GACGCCGCGC TGAAGATCGA TCCGCGGCTG
ACCTCCTCGC TGTACGGCCG CGGCCTCGCC AAGCAACGCA ACGGCGCGGT CGCCGAAGGC
GAGCGGGACG TCAACACCGC CAAGGCCATG GACCCCAACA TCGTGCAGGA ATTCGACGGC
TACGGGGTGC GCTGA
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| Protein sequence | MPVASSKLTA PQVRSAQITL DPRRMTIRLA LIAILSLAMS PLIEAAAAAE RVALVIGNAK
YPDSEKPLKE PINDARELGE ELQRAGFDVE IGENLNGEAM RRAFDRLYAR VEPGAVALVF
FSGFGIQSNR QSYLIPVDAQ IWTEPDVRRD GVSLETVLGE INSRGAAIKV ALLDASRRNP
FERRFRSFSA GLAPVVAPNG SLVMYSAALS SVVSDNGGDH GLFVGELVKA LRDPGSSVED
TLSRTRLGIT RASKNEQVPW ISSSLTDEFS LSPGPQPTVA LNAPPPTGAA PTAAPALPAP
IEIAKPNPAA AAPQAAAKPA EPNLAAPEPA KAPASQLALA EDPTIKALSG KLADNPDDAN
ALYRRGQVYA SRGAYALAVQ DFDATIRLNP RDVEAYNNRC WVRTVTGDLT AALKDCNEAL
RLRPNFADAL DSRGLVNLKN GQIKNAIADF DAALKIDPRL TSSLYGRGLA KQRNGAVAEG
ERDVNTAKAM DPNIVQEFDG YGVR
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