| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0876 |
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| Symbol | |
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| ID | 3969795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 965338 |
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| End bp | 967317 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923992 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_530765 |
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| Protein GI | 90422395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATTCT TGACCACTAG CCCGCCGCTC GCCCGAGCCC TGGCGGAACG TAATTACAAT
GACCCGACAC CGGTGCAGAC CGCGGTGCTC GCCGACCAGG CCGCCGGGCG CGACCTTCTG
GTGTCGGCGC AGACCGGCTC GGGCAAGACC GTCGCCTATG GGCTGGCGAT CGCCAAGAAT
CTGCTCGGCG ACGCCGAGCG CTTCGAACAG GCCGCGGCGC CCTTGGCGCT GATCGTCGCG
CCGACCCGCG AACTGGCGCT GCAGGTGCAT CGCGAACTGG CGTGGCTGTA TGCCTACGCC
GACGCCCGCG TGGTGTCCTG CGTCGGCGGC ATGGACCCGC GGCAGGAGCA GCGCGAGCTG
GCCCGCGGCG CCCATATCGT GGTCGGCACG CCGGGACGGC TGTGCGACCA TCTGCGGCGC
GGCCGGCTCG ACGTCTCGCA ATTGAAGGCC GTGGTGCTCG ACGAGGCCGA CGAGATGCTC
GATCTCGGGT TTCGCGAGGA CATGGAGTTC ATCCTCAAGA CCACGCCGCC GACCCGCCGC
ACGCTGCTGT TCTCGGCGAC GCTGCCGCGC GGCATCGTCG CCTTGGCCAA GCAGTATCAG
CAGCAGGCGT TCCGCGTCGA AGTTGCAAAC GGTGAGGGCG GCCACGCCGA CATCGAATAT
CAGGCGATCC GCATCGCGCC CGGCGACGTC GAGCACGCCG TGGTCAACGT GCTGCGCTTC
CATGAATCGC CCAGCACCAT CGTGTTCTGC AACACCCGCA ACGCGGTGAA GCATCTGCAG
ACCGCGCTGT TGGAGCGCGG CTTCTCGGTG GTCGCGCTGT CCGGCGAACT GACCCAGAAC
GAGCGCACCA TGGCGCTGCA GTCGCTGCGC GACGGCCGCG CCCGGGTCTG CGTCGCCACC
GACGTCGCGG CGCGCGGCAT CGATCTGCCG AACCTGGCGC TGGTGATCCA CGCCGATCTG
CCGAACGACG CCGAGGTGAT GCAGCATCGC TCCGGCCGCA CCGGCCGCGC CGGCAAGAAG
GGCGTCAGCG TTCTCTTGGT GCCGCCGGCG CGCCGCCGCC GCGCTGAATT GCTTTTGAAT
CTCGCCGGCA TCGACGCGGT GTGGGGCACA GCACCCAGCG CCGACGAGAT CCGCAAGCTC
GATCAGGAAC GCATGTTCCA GGACGCGCTG TTCGCCGAGG AGCCCTCGGC CGAGGATCTG
GTGCTGGCGC AGGCGCTGCT CGCCGAGCGC TCGCCGGAAT ATATCGCCGC GGCTTTGGCG
CGGCTGTATC GCGCGCGGCT GCCGTCGCCG GAAGACATTT TGGATCCCGG CGAACGCGGC
GCCCGCTCGC GCGAGCCGCG CGCGACGACG CGGGGGGATT CCCGGCCGCG CGCCGAGGAC
CGCGACTACA GCCCGAAAGC GCGACCCGGC AAAGCCTCGA CGCGTCATGC CATGGAAGGC
GGCGTTTGGT TTCGCGCCGC GATCGGCCGC AAGAAGAACG CCGAAGCGCG CTGGCTGCTG
CCGATGATCT GCCGCCGCGG CGGCATCGAC AAGCAGGACA TCGGCGCGAT CCGGATTCAC
GACACCACCA CCGAGTTCGA GATTTCCGGC GCCGCGGCGG AGTCCTTCGC GGCGATGATC
CGGCGTCCCG ACAAGGAAGA CAATATCCGC ATCGAGGCGA TGGGCGACGC TCCCGCCGCG
CAGCAGGCCC CGGACCGGCG GCCGCCGGCC GGCAAGCCCT ATGAGCGCAA GCCATCCAGC
GACAAATCGT ATGACCGCAA CCACGCGGGC GATGGCGCCC CGCGTGACGC CAGCTTCAAG
ACGAAAAAAT CCTACGACAA ACCGGGCTAC GACAAGCCTG CGTATGACAA GCCCGCCTAT
GACCCCCTGG CGAACGACAA GCCGATGTAC GCCGAAGTCT CGCCGAGCGG CGGCAGCTTC
GAACTGAAGC CGGCGTTCGA CAAGAAACCG AAAAAGCCGA AGAAGAAGTT TCGCGAATAA
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| Protein sequence | MTFLTTSPPL ARALAERNYN DPTPVQTAVL ADQAAGRDLL VSAQTGSGKT VAYGLAIAKN
LLGDAERFEQ AAAPLALIVA PTRELALQVH RELAWLYAYA DARVVSCVGG MDPRQEQREL
ARGAHIVVGT PGRLCDHLRR GRLDVSQLKA VVLDEADEML DLGFREDMEF ILKTTPPTRR
TLLFSATLPR GIVALAKQYQ QQAFRVEVAN GEGGHADIEY QAIRIAPGDV EHAVVNVLRF
HESPSTIVFC NTRNAVKHLQ TALLERGFSV VALSGELTQN ERTMALQSLR DGRARVCVAT
DVAARGIDLP NLALVIHADL PNDAEVMQHR SGRTGRAGKK GVSVLLVPPA RRRRAELLLN
LAGIDAVWGT APSADEIRKL DQERMFQDAL FAEEPSAEDL VLAQALLAER SPEYIAAALA
RLYRARLPSP EDILDPGERG ARSREPRATT RGDSRPRAED RDYSPKARPG KASTRHAMEG
GVWFRAAIGR KKNAEARWLL PMICRRGGID KQDIGAIRIH DTTTEFEISG AAAESFAAMI
RRPDKEDNIR IEAMGDAPAA QQAPDRRPPA GKPYERKPSS DKSYDRNHAG DGAPRDASFK
TKKSYDKPGY DKPAYDKPAY DPLANDKPMY AEVSPSGGSF ELKPAFDKKP KKPKKKFRE
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