| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0855 |
|---|
| Symbol | |
|---|
| ID | 3969813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 943840 |
|---|
| End bp | 944820 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923971 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_530744 |
|---|
| Protein GI | 90422374 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.584451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAT TGACACGACG CGATTTTGCG TTTGGATCGG CAGCGGCGGC CGCGCTACTC
GCCGCGGGTC GGCCGGCCTT GGCTGCCGAC GTCGCGGTGC GTTGGGCTTC GCTGCAGCCC
GGCTTCACCG TGCTGCCGGT GCAATACATC CTCGCCAACA AGCTCGGTCA AAAGCACGGG
CTGACGCTGC CCGATCCCGC GCCCTACACC GCGGTCTCGA CCTACTACAA TGATTTTGTC
GCCGGCAATT ACGATGTCTG CATCGGCAGC TGGGACACTT TCGCCGCGCG GCACCAGGCC
GGCGTGCCGA TCAAATATCT CTGCACCATC ACCGACGCCA ATATGATTGC GCTGCTGGCG
CCGAAGTCCG GCGTCGCCGA CGTGACGCAA CTCCGCGGCA AGACCATCGC GGCGCTGCAA
TCGACCGGCA CCTATCGGAT GGTGCGGGCG CTGATCAAGG AAGGCAGCGG CCTCGATATC
GAGAAGGACG CCACCATCCA GAACGTCGAC AATCCGGCGG CCTCGGTCAC GCTGGTGATG
GCGGACCGCG CCGACGCAGC CTTGTCGTGG GAGCCGAACA TCACCACCGG CCTCGTGAAG
AAGCCGGACC TGCGGGTGAT CTTCAAAGCC GGCGACGCCT ATCACAAGAT CGGCGAGGGC
GACCTGCCGT ATTTCGGCGT CGGCATCCGC CAGGAGCTCT TGGACAAGAA CCCCGGCATC
GCCGCCAAGA TCGCCGCCGT GTTCGAGGAT TGCCTCAAGG GCATCAACGC CGACACCGCC
AAGGCGGTCG ACCTGTTCGG CGCCAAGACC GGGGTGGCCA ACGACATCTT GAAAGAGGCG
ATGGGCTCGA AGCGGCTGAC CTTCAATTTC CGGCCGATGT CCGACCCGGC GTCGCGCAAA
TCGGTGCTGA AGGCCAGCGA GTTCTTGGCT CGCAACGGGC TTCTGACCAA GCCGGTCGAC
GACAGCTTCT TCGCGATCTG A
|
|---|
| Protein sequence | MNGLTRRDFA FGSAAAAALL AAGRPALAAD VAVRWASLQP GFTVLPVQYI LANKLGQKHG
LTLPDPAPYT AVSTYYNDFV AGNYDVCIGS WDTFAARHQA GVPIKYLCTI TDANMIALLA
PKSGVADVTQ LRGKTIAALQ STGTYRMVRA LIKEGSGLDI EKDATIQNVD NPAASVTLVM
ADRADAALSW EPNITTGLVK KPDLRVIFKA GDAYHKIGEG DLPYFGVGIR QELLDKNPGI
AAKIAAVFED CLKGINADTA KAVDLFGAKT GVANDILKEA MGSKRLTFNF RPMSDPASRK
SVLKASEFLA RNGLLTKPVD DSFFAI
|
|---|
| |