Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0852 |
Symbol | |
ID | 3969849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 940335 |
End bp | 941141 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637923968 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_530741 |
Protein GI | 90422371 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0609667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCAA CCTACGCCTT CACCGATCCC CGCCTCGGCA AGCTCGATGG CTTTCACGTC GAGATCGACG AAGCCCATGA GCGCGCCGAC ATCATCCTCG ACCGGCCGCC CTACAACGTC GTCAGCATGC CGCAGCGCGA TCAGTTGCGG CTGGTGTTCG AAACGCTCGA CGCGGACGAC CGCGTCCGCG TCATCGTGGT GCGCTCGGTC GGCGAGCATT TTTCCAGCGG CGGCAATATC GGCGGCTTCA TGGAAGCCTC GCCGGAGCAC GTCTCCAAGC TCGCCTGGAA CATCGCAGCC CCGGCGCGCT GCGCCAAGCC GGTGATCGTC GCCAATCGCG GCTATTGCTT CGGCGTCGGA TTTGAATTGT CGCTGGCCTG CGATTTCCGG CTGGCGTCGG AGACCACCCA ATATGCGCTG CCGGAGCAGA AGCTCGGCCA GATCCCCGGC TCCGGCGGCT CGGCGCGGCT GCAGAAGATG GTCGGCATCA CCCGCACCAA GGACATCGTG ATGCGCTCCA AGCGCATTCC CGGCAAGCAG GCGCTGGAGT GGGGCATCGC CACCGAATGC ATGCCCGACG CCGATCTGGA AAAGGCCACC GACAAATTGG TCGACGAGTT GCGCGCGTTC TCGCCGCTGG CGCAGCGCAC CGCCAAGAAG CTTCTGAACG ACACCGAGGA CTCCACGCTG GCGATCGCGA TCGAGCTGGA AGGCCATTGC TACAGCCGGC TGCGGCAATC CGACGACTTC AAGGAAGGCG TCGAAGCCTT CAACAGCAAG CGCGCGCCGA AATTCACCGG GCGCTGA
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Protein sequence | MPSTYAFTDP RLGKLDGFHV EIDEAHERAD IILDRPPYNV VSMPQRDQLR LVFETLDADD RVRVIVVRSV GEHFSSGGNI GGFMEASPEH VSKLAWNIAA PARCAKPVIV ANRGYCFGVG FELSLACDFR LASETTQYAL PEQKLGQIPG SGGSARLQKM VGITRTKDIV MRSKRIPGKQ ALEWGIATEC MPDADLEKAT DKLVDELRAF SPLAQRTAKK LLNDTEDSTL AIAIELEGHC YSRLRQSDDF KEGVEAFNSK RAPKFTGR
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