Gene RPC_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0852 
Symbol 
ID3969849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp940335 
End bp941141 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID637923968 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_530741 
Protein GI90422371 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0609667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCAA CCTACGCCTT CACCGATCCC CGCCTCGGCA AGCTCGATGG CTTTCACGTC 
GAGATCGACG AAGCCCATGA GCGCGCCGAC ATCATCCTCG ACCGGCCGCC CTACAACGTC
GTCAGCATGC CGCAGCGCGA TCAGTTGCGG CTGGTGTTCG AAACGCTCGA CGCGGACGAC
CGCGTCCGCG TCATCGTGGT GCGCTCGGTC GGCGAGCATT TTTCCAGCGG CGGCAATATC
GGCGGCTTCA TGGAAGCCTC GCCGGAGCAC GTCTCCAAGC TCGCCTGGAA CATCGCAGCC
CCGGCGCGCT GCGCCAAGCC GGTGATCGTC GCCAATCGCG GCTATTGCTT CGGCGTCGGA
TTTGAATTGT CGCTGGCCTG CGATTTCCGG CTGGCGTCGG AGACCACCCA ATATGCGCTG
CCGGAGCAGA AGCTCGGCCA GATCCCCGGC TCCGGCGGCT CGGCGCGGCT GCAGAAGATG
GTCGGCATCA CCCGCACCAA GGACATCGTG ATGCGCTCCA AGCGCATTCC CGGCAAGCAG
GCGCTGGAGT GGGGCATCGC CACCGAATGC ATGCCCGACG CCGATCTGGA AAAGGCCACC
GACAAATTGG TCGACGAGTT GCGCGCGTTC TCGCCGCTGG CGCAGCGCAC CGCCAAGAAG
CTTCTGAACG ACACCGAGGA CTCCACGCTG GCGATCGCGA TCGAGCTGGA AGGCCATTGC
TACAGCCGGC TGCGGCAATC CGACGACTTC AAGGAAGGCG TCGAAGCCTT CAACAGCAAG
CGCGCGCCGA AATTCACCGG GCGCTGA
 
Protein sequence
MPSTYAFTDP RLGKLDGFHV EIDEAHERAD IILDRPPYNV VSMPQRDQLR LVFETLDADD 
RVRVIVVRSV GEHFSSGGNI GGFMEASPEH VSKLAWNIAA PARCAKPVIV ANRGYCFGVG
FELSLACDFR LASETTQYAL PEQKLGQIPG SGGSARLQKM VGITRTKDIV MRSKRIPGKQ
ALEWGIATEC MPDADLEKAT DKLVDELRAF SPLAQRTAKK LLNDTEDSTL AIAIELEGHC
YSRLRQSDDF KEGVEAFNSK RAPKFTGR