| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0829 |
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| Symbol | |
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| ID | 3969864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 913500 |
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| End bp | 914102 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923945 |
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| Product | 3-oxoacid CoA-transferase, subunit A |
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| Protein accession | YP_530718 |
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| Protein GI | 90422348 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.201615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGGCG GATTCATGGG CGTGGGATCA CCGTTGCGCA TGATCGACGC GTTGATCGCG
CGCGGCGCGC GCGATCTCAC CATCATCGCC AATGACACGG CCCACCCGGG ATTTGCCATC
GGCAAGCTGA TCGATGCCGG CTGCGTCTCG AAAGTCATCG CCTCGCATAT CGGCCTCAAC
CCGGTCACGC AGAAAGCCAT GATCGCCGGC GATATCGCGG TGGAGCTGGT GCCGCAAGGT
ACGCTGGCCG AACGCATTCG CGCCGGCGGC TTCGGCCTCG GCGGCATCCT GACGGCCACC
GGCATCGGCA CCGTCGTGGA GGACGGCAAG CAAGTCATCG AGAGTGATGG CGAGGTTTAC
TTGCTGGAGA AGCCGTTGAA GGCCGACTTC GCGCTGGTCA AGGCGAAAAC GGCGGATCAC
GGCGGCAACC TCGAATATTC CCTCACCGCG CGCAACTTCA ACCCGATGAT GCCGATGGCG
GCTGCCACCG TCATCGCCGA AGTCGATCAC ATCGTTCCGC TGGGCGGCAT GCCGCCCGAT
AACGTCGTCA CGCCGGGTGT GCTGGTGGAC TACCTCGTTG CCAAGGAGGC TTCCCATGGA
TGA
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| Protein sequence | MIGGFMGVGS PLRMIDALIA RGARDLTIIA NDTAHPGFAI GKLIDAGCVS KVIASHIGLN
PVTQKAMIAG DIAVELVPQG TLAERIRAGG FGLGGILTAT GIGTVVEDGK QVIESDGEVY
LLEKPLKADF ALVKAKTADH GGNLEYSLTA RNFNPMMPMA AATVIAEVDH IVPLGGMPPD
NVVTPGVLVD YLVAKEASHG
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