Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0828 |
Symbol | |
ID | 3969863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 911058 |
End bp | 912899 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637923944 |
Product | sensory histidine kinase AtoS |
Protein accession | YP_530717 |
Protein GI | 90422347 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.167481 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGCGCG GGCTGCCCGG CCTGCCGCAC TCGCTGCGCG GCAAGCTTTT GCTGCTCTCG CTGATCGTGG TGTCGGTGCC GATCATGACG GCGGGGTACT TCCTCGATCG TCAGGGACAA CAGACGCTTC TGCAGGAGAA GGAGGAGCGG CTGTTCGGTC TTGACCGTTT GCTCGATGCG CAGCTCGGCA GCGGCTTCGA CGCGCTGCTG GCGGATTACG ACGGCGATAG GGCGGATGGC GCTGCCATGG TGCGCCATCT CAATGCCCGC CTCGCCACCG TGACCGACCA GATGGCCGCG GCCAATCCCG GGGTCGGCGT GGGATATTAT GACCTGGAGC GCAACGCGAT CGTCACCTAT GGTCCGAGCG CGCAATACGG CGCCACGGTC GGCCGTCCGA TCCCGCCCGA CCATCCCGGC TGGGCGGTGA TGCGAAGCGG CAAGCCCGCC ATGGAGGCCG GACCGCAGGT GCGCGGCCTC ATCCTCAACG CGATGTGGCC GATCGTGCGC AACGACCGCG TGCAGGGTTA CGTCTGGGCC AACCAGCTCT CCGACGACGT CGACCATCAA ACCGCGGCGA TGGATCGGGC GATCCTCGCC GTCACCATCG CCGGCGTGGT ACTTGGCATT CTATTGACCC AGGCGATGTC GCGCGGTCTC ACCCGCGATG TTCGCTTGGT GACCGACGGT CTCGCCCGAT TGCGCACCGA CCTGCACCAC AGCATTCCGC CGCTGGCTGG TGAAATCGGC GAGATCGCCG CCAAGATCAA CGTCATGGCG CAGTCTCTGC TGGACGCCAA ATCGCTCACT GAAGATATCG TGCAGAGCAT CGCCGACGGC GTCATCGCCA TCGACCGCGA TGGCCGGATC ACCGCGATCA ACCCGGCGGC GCGGCACATG GTCGGCGTCG CCGAGGCGGA GGCGATCGGC CGGCCCTATA ACTCGCTGTT CGATCCGGCG GCGCCGTTTT CCAGCGTGCT GCTCGACACC CTCGAACACG GCTGCGAACA TGTCGATGTG GCGGTGGAAA TGCCGCTGCC ACGGCAGATG CTGGACGTCA GCGCCAGCAG CAGTCTGCTG CGCGACAGTC ACGGCACGGC GATCGGCGCC GTGGTGGTTC TGAAGGACCG AACCGAGCAG AGCCGGCTGC GCACGCAGGT GATGCGCGCC GATCGGCTGG CTGCGCTAGG CGAACTGATG GCGGGCGTGG CGCATGAAAT CCGCAATCCG TTGACCTCGA TCCGCGGCTT CGTCCAGTTC CTCGAAGCCT GTGACGACGT CCGCGAATGG CGACGCTATT CGCCGGAGAT CATTCGCCAG GTGGACAGCC TCAACCGCAT CATCACCGAG TTGCTCGAGT TTGGCCGTCC GCGTCCCCCC GCGATCCGGC CGGTGCAGCT CAACGATCTG GTGCACGAAG TCACGCGCCT CGCCGGCCAT AAGGCGAACG TCCAGTTGCG GCTTGCGCTG TGCGCGGAGC TGCCGCTGAT CGAGGCCGAC GGCGAGGCGC TGAAACAGGC GCTGCTGAAC CTGCTGATCA ACGCGATGCA GGCGGTGGAG ACTCTGGGCA CGGTGCGCAT CGAGACGCAT GTCGAGGCTG ACGGCGCCAC CGTCGCGGTC GCCATCAGCG ACGACGGCGC CGGCATCCTG CCGGAAGACC TGGAGAAGAT CTTCGACCCG TTCTTCTCGA CCAAGCCGCA GGGCACTGGA CTTGGCCTCG CCATGGTGCA TCGTATCGTC GATGCCCATC ACGGGACGGT CGCCATGACC AGTCGCCCCG GCGCCGGAAC CGTCGCCACC ATGCGTTTGC CGCGCCTGCA CATCAAGAAG GACGAGGTTT GA
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Protein sequence | MPRGLPGLPH SLRGKLLLLS LIVVSVPIMT AGYFLDRQGQ QTLLQEKEER LFGLDRLLDA QLGSGFDALL ADYDGDRADG AAMVRHLNAR LATVTDQMAA ANPGVGVGYY DLERNAIVTY GPSAQYGATV GRPIPPDHPG WAVMRSGKPA MEAGPQVRGL ILNAMWPIVR NDRVQGYVWA NQLSDDVDHQ TAAMDRAILA VTIAGVVLGI LLTQAMSRGL TRDVRLVTDG LARLRTDLHH SIPPLAGEIG EIAAKINVMA QSLLDAKSLT EDIVQSIADG VIAIDRDGRI TAINPAARHM VGVAEAEAIG RPYNSLFDPA APFSSVLLDT LEHGCEHVDV AVEMPLPRQM LDVSASSSLL RDSHGTAIGA VVVLKDRTEQ SRLRTQVMRA DRLAALGELM AGVAHEIRNP LTSIRGFVQF LEACDDVREW RRYSPEIIRQ VDSLNRIITE LLEFGRPRPP AIRPVQLNDL VHEVTRLAGH KANVQLRLAL CAELPLIEAD GEALKQALLN LLINAMQAVE TLGTVRIETH VEADGATVAV AISDDGAGIL PEDLEKIFDP FFSTKPQGTG LGLAMVHRIV DAHHGTVAMT SRPGAGTVAT MRLPRLHIKK DEV
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