Gene RPC_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0826 
Symbol 
ID3969861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp907506 
End bp908834 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID637923942 
Productcitrate transporter 
Protein accessionYP_530715 
Protein GI90422345 
COG category[C] Energy production and conversion 
COG ID[COG2851] H+/citrate symporter 
TIGRFAM ID[TIGR00784] citrate transporter, CitMHS family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.573841 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGCCA TACTCGGATT GATTACAATT CTGGCGTTGT TGACCGCCAT ATTGACCAAC 
AAGCTTTCGC CGCTGGTCGC CTTGATCGTC ATTCCCATCA TCGCTTCGCT GATCGGTGGG
TTTGGACCGC AAACCGCCAC CTTCATCGTC AGCGGCGTCA AGAACATTGC GCCCACGGCT
GCGATGTTCG TTTTCGCCAT CGTGTTCTTC GGCATTCTGA CCGATGCCGG CATGATGGAT
CCGATCATCG ACCGCATCCT GAAAGCCGTC GGTCTGAAGC CGACCCGCAT CGCGGTCGGT
TCGGCGCTAC TCGCCTTGAT CATCCATCTG GATGGCTCGG GCGCCGTGAC GTTCCTGATC
ACCATCCCCG CCATGCTGCC GTTGTACGAC AGGCTCGGAA TGCAGCGTCG CATCCTTGCG
CTGGTCGTCT CGTTGGCCGC GGGCGTCAAC TTCCTGCCCT GGACAGGTCC GGTGCTACGC
GCCTCGGCGG CGCTGAACGT GCCGGTCTCC TCGATCTTCT CGCCGTTGGT GCTCGTGCAG
CTTGTCGGTC TGATCTTCGT GTTCTCGGTG GCTTGGTACA TGGGTAAACG CGAGGAGCGT
CGCCTCGGTC TTGGTGCCAG TGCCGTGGCC GCCGCGGGCG GTGGCGCCGA TCAAGTGACT
TATAAGCGCG AGCTGACGGA TGCCGAGAAG GAGATCCGTC GTCCGCGGCT GTTCTGGGTC
AACATTCTGC TCGCGCTGGT GATTCTCGGC ACGATGATCT CCGGTTACGT CGATGCGGCC
CCGATGTTCA TGGTCGGCAC CGTGCTGGCG CTGATGATCA ACTATCCGAA CGTCAAGGAT
CAGAAGAACC GCGTCGACGC CCATGCCAAG GCGGCGCTGA TGATGGCTTC CATTCTGTTC
GCCGCGGGCG CCTTCACCGG CATCATGGGC GGCACCGGAA TGATCAAGGC CATGGCCGCG
GCCGGCGCTG CCTATGTTCC TGCCCAGCAC GCTCAGGCTA TTCCGTTCAT CACCGGCATC
ATCTCGATGC CGCTGAGCCT GCTGTTCGAC CCGGATTCTT ACTACTTCGG TGTGATGCCG
GTTCTGGCCA ACGTCTATCA CAGCTTCGGC GGTGATCCGA TCCATGTCGC CCAGGCCTCG
ATCCTCGGCC AGATGACGAC CGGTTTCCCG GTCAGCCCGC TGACGCCTGC GACCTTCCTG
ATCATGGGCC TCACCGGCGT CAGCCTCGGC GAGCACCAGA AGCTATCGAT CCCGTTCCTG
TTCGCCGCGA CCGTCCTGAT GACGATCACG GCGACCATTC TCGGCGTCAT TCCGTCCCCG
ATCGGCTGA
 
Protein sequence
MLAILGLITI LALLTAILTN KLSPLVALIV IPIIASLIGG FGPQTATFIV SGVKNIAPTA 
AMFVFAIVFF GILTDAGMMD PIIDRILKAV GLKPTRIAVG SALLALIIHL DGSGAVTFLI
TIPAMLPLYD RLGMQRRILA LVVSLAAGVN FLPWTGPVLR ASAALNVPVS SIFSPLVLVQ
LVGLIFVFSV AWYMGKREER RLGLGASAVA AAGGGADQVT YKRELTDAEK EIRRPRLFWV
NILLALVILG TMISGYVDAA PMFMVGTVLA LMINYPNVKD QKNRVDAHAK AALMMASILF
AAGAFTGIMG GTGMIKAMAA AGAAYVPAQH AQAIPFITGI ISMPLSLLFD PDSYYFGVMP
VLANVYHSFG GDPIHVAQAS ILGQMTTGFP VSPLTPATFL IMGLTGVSLG EHQKLSIPFL
FAATVLMTIT ATILGVIPSP IG