Gene RPC_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0813 
Symbol 
ID3969885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp895819 
End bp896862 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID637923929 
Producthypothetical protein 
Protein accessionYP_530703 
Protein GI90422333 
COG category[S] Function unknown 
COG ID[COG5480] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.780692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.905523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGACCG CGCGTCGCGA CGAACACCGC AGTCGCGGCC AGGCTGTTGC TGGCCACGCG 
CTCCGCTTCG GCCTGGCGCT ACTGGCGCTT TCCGCGATCA CTCCCGCCTA TGCCGACCTG
AAACTCTGCA ACCGGATGAG CTACGTGGTC GAGGCCGCGA TCGGCATCGA CGACAAGGCG
TCCACTGCCA GCCGCGGCTG GTTCCGGATC GATCCGGCGC AATGCCGCGT CGTGGTGCAG
GGCACGCTGA CGGCCGACCG CATCCTGCTG CACGCCCGCG CGCTCGGGGT GTACGGCGCC
TCGCCGGTGC CGCAGAACGG CAGCGACCGG CTGTGCATCG CGCCGGACAA TTTCGTCATC
GCCGCGGCGC GGCAGTGCCG CAGCGGCCAG ACCGCGGCGC CGTTCACCGA GATCAAGCCG
ACCGCGACCG ACGACGGCAA TCTGGTCGCC TATCTGGCCG AGGACAGCGA ATATGACGAC
GAGCAGGCCA AGCTCGCCGG CATCCAGCGG CTGTTGGTGA TCGCCGGTTA CGACGCTGCC
CCGATCGACG GCGTCGACGG CCCGAAGACC CAAGCCGCGC TGGCGGCGTT TCTGAAAAGC
CGCGGGCTTG CCGCCGACGT GGTGCAGGCG CCGAATTTGT TCGACGCCAT GATCAAGGCG
GTCGAGGCGC CCTCCAGCAC CGGGCTGACG TGGTGCAACG ACACCCCGCA CAAGATCATG
GCCGCGGTCG GCAGCGACGA CGGCAAGGCG GTGACCAGCC GCGGCTGGTA CCGCATCGAT
CCCGGCAAGT GCCTGCATCC CGATGTCTCG GGCCAGCCGA AGCAGCTCTA CAGCTTCGCC
GAAGCGGTGA ACGCCGACAA TCGCGCCGTG AAGATCAAGG ACAAGCCGCT GAGCTGGGGC
GGCGGCGTCA TGCTGTGCAC CCGCGACAGC AAATTCGAGA TCAACGACCA GCACGATTGC
GCCGCTCGCG GCTTCAACCG CACCGGCTTC ACCTCGGTCG ACCTTTCGAG CGGCGGCAAG
ACGCTGCGTT TCACGCTGCC CTGA
 
Protein sequence
METARRDEHR SRGQAVAGHA LRFGLALLAL SAITPAYADL KLCNRMSYVV EAAIGIDDKA 
STASRGWFRI DPAQCRVVVQ GTLTADRILL HARALGVYGA SPVPQNGSDR LCIAPDNFVI
AAARQCRSGQ TAAPFTEIKP TATDDGNLVA YLAEDSEYDD EQAKLAGIQR LLVIAGYDAA
PIDGVDGPKT QAALAAFLKS RGLAADVVQA PNLFDAMIKA VEAPSSTGLT WCNDTPHKIM
AAVGSDDGKA VTSRGWYRID PGKCLHPDVS GQPKQLYSFA EAVNADNRAV KIKDKPLSWG
GGVMLCTRDS KFEINDQHDC AARGFNRTGF TSVDLSSGGK TLRFTLP