| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0812 |
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| Symbol | |
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| ID | 3969884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 895093 |
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| End bp | 895800 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637923928 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_530702 |
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| Protein GI | 90422332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.935066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.61408 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCG CTGACGCGCA ACCGCGGAAC TTCACCCGGA TCGACACCTG GGTGTTCGAC
CTCGACAACA CGCTGTATCC GCACCACGTC AATTTGTGGC AGCAGGTCGA CGTCCGGATC
CGCGACTTCG TCGCCGCCTA TCTCGACATT CCGGCCGAGG ACGCCTTCCG GATTCAGAAA
GACTATTATC GCCGCTATGG CACCACGATG CGCGGCATGA TGACCGAGCA CGGCGTCCGC
GCCGACGATT ACCTGGCTTA TGTGCACGAG ATCGACCATT CGCCGCTGGA GCCGAATCCG
GCGATGGGCG CGGCGATCGC CGCATTGCCC GGGCGCAAGC TGATCCTCAC CAACGGCTCC
ACCGAACACG CCGCCAAAGT TTTGGCGCGG CTCGGCATCG AACATCATTT CGAGGCGGTG
TTCGACATCG TCGCCGCCCA ACTGGAGCCG AAGCCGGCGC CGCAGACCTA TCAGCGCTTC
CTCGATCTGC ATGGCGTCGA TCCGACCCAT GCTGCGATGT TCGAGGATCT CGCCCGCAAT
CTCGCGGTGC CGCATCGGCT GGGCATGACC ACGGTGCTGG TGGTGCCCGA CGGCAGCAAA
GAGGTGGTGC GCGAGGACTG GGAGCTGGAA GGCCGCGACG CCGTCCATGT CGATTTCGTC
ACCGACGATC TGACCGGGTT CTTGGTGGGG CTCAATCCAA TACGATAG
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| Protein sequence | MTLADAQPRN FTRIDTWVFD LDNTLYPHHV NLWQQVDVRI RDFVAAYLDI PAEDAFRIQK
DYYRRYGTTM RGMMTEHGVR ADDYLAYVHE IDHSPLEPNP AMGAAIAALP GRKLILTNGS
TEHAAKVLAR LGIEHHFEAV FDIVAAQLEP KPAPQTYQRF LDLHGVDPTH AAMFEDLARN
LAVPHRLGMT TVLVVPDGSK EVVREDWELE GRDAVHVDFV TDDLTGFLVG LNPIR
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