| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0810 |
|---|
| Symbol | |
|---|
| ID | 3969882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 893579 |
|---|
| End bp | 894046 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923926 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_530700 |
|---|
| Protein GI | 90422330 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3152] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.431114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTGA CCACGCTGCT GTTCAGCTTC AACGGCCGCA TCAACCGCGC GAAGTACTGG
CTCGCCGTCT CGATCTACGT TGCCGCCTGG ATCGCATTCG CCGGCATCGC CTTGCTGGTG
ATCGGCGACC TCAACAAGGA CGATCGTTTC GCCTTCGCCG GCACCGGCAT CGTGCTGTGG
CTGGGCGGCG TGTTGCTGTT CCTGATCGGC GTCTGGTCGG GCCTCGCGGT CGGCATCAAA
CGGCTGCACG ACCGCGACAA GAGCGCCTGG TGGCTGCTGT TGTTCTGGCT CGGGCCGAGC
CTGCTCGGCG GCGGCAGCCG CACCGTGCTG CATGGCGGCA GCAGCCTCGT CTCGTCGTTG
CTGAGTGCCG CGATCTCGAT CTGGGCGTTC GTCGAATTAG GTTGCCTGCG CGGCACGCCA
GGCCCGAACC TTTATGGGCC GGATCCGCTC GCCCCCCCGG AGTACTGA
|
|---|
| Protein sequence | MDLTTLLFSF NGRINRAKYW LAVSIYVAAW IAFAGIALLV IGDLNKDDRF AFAGTGIVLW
LGGVLLFLIG VWSGLAVGIK RLHDRDKSAW WLLLFWLGPS LLGGGSRTVL HGGSSLVSSL
LSAAISIWAF VELGCLRGTP GPNLYGPDPL APPEY
|
|---|
| |