| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0807 |
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| Symbol | truA |
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| ID | 3969879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 890918 |
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| End bp | 891655 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923923 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_530697 |
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| Protein GI | 90422327 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.444525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCGCT ACAAGCTCAT CATCGAATAT GACGGCGCGC CGTATTGCGG CTGGCAGATC
CAGGACAACG GCCCCTCGGT GCAGGGCGCG CTGGAGACCG CGGTCAAGGC GATCTGCGGC
AAGTTCGTCC GCGTCAACGG CGCCGGCCGC ACCGACGCCG GCGTGCACGC GCTGGCGCAG
GTGGCGCATT GCGACATCGC CAAAGAGTTC GCGCCGGGCC GGCTGCGCGA CGGCTTGAAC
GCGCATCTGC GGCCGCATCC GATCGGCGTG CTCAGCGCCG AGATCGTGCC GGATGACTTC
GAGGCGCGGT TCTCGGCGAT CAAACGGCAC TACGTCTATC GGATCAGCAA CCGCCGCGCC
AATCTGGCGC TGCAGATCGG CAAGGTGTGG CGGCTGCCGC GACGACTCGA TACTGACGCC
ATGCACGCGG CCGCGCAGCG GCTGGTCGGC AAGCACGACT TCACCACGTT TCGCGACACC
GAATGTCAGG CCAAGTCGCC GGACAAGACG CTCGATCAGC TCGACGTGAT CCGCGACGGC
GACAACGTGT CGATTATCAC CTCGGCGCGC TCGTTCCTGC ACAGCCAGGT GCGCTCGATG
GTCGGATCAT TGGTGTGGGT CGGCGAGGGC CGCTGGAGCG CCGACGATCT CGCCGCGGCG
CTGGCGGCGC GCCGCCGCAC CGCCTGCGGC CCGGTGGCGC CGCCGGACGG GCTGTATTTG
GTGAAGGTGG ATTATTGA
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| Protein sequence | MPRYKLIIEY DGAPYCGWQI QDNGPSVQGA LETAVKAICG KFVRVNGAGR TDAGVHALAQ
VAHCDIAKEF APGRLRDGLN AHLRPHPIGV LSAEIVPDDF EARFSAIKRH YVYRISNRRA
NLALQIGKVW RLPRRLDTDA MHAAAQRLVG KHDFTTFRDT ECQAKSPDKT LDQLDVIRDG
DNVSIITSAR SFLHSQVRSM VGSLVWVGEG RWSADDLAAA LAARRRTACG PVAPPDGLYL
VKVDY
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