| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0805 |
|---|
| Symbol | |
|---|
| ID | 3969877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 889380 |
|---|
| End bp | 889799 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923921 |
|---|
| Product | PilT protein-like |
|---|
| Protein accession | YP_530695 |
|---|
| Protein GI | 90422325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.402403 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGTTC TCGACACCAA TGTGGTCTCC GAAGGTCTCC GGCCGAAGCC GAACCTCGGG
GTCCGCGATT GGCTCGACAC CCAGCCGGCC GACGCGCTTT TTATTTGCGC GCCCGTGTTG
GCTGAGATCC GCTTCGGCAT CGAACGGCTG GACGCCGGCG TGCAGCGTCA GACGCTGCTG
GCGTGGGCTG CCCGACTGGA GAGCGAGACG TTCTTCGACC ACATCCTTCC ATTCGACGCT
GCCGCGGCGA CAATCTATGG ACGGATCGCG GCGCAGCGCC AATCGGCGGG ACGGCCGATC
GGCATCGTGG ACTGCATGAT CGCGGCGATT GCGCTCGCGC ACCAAGCCGC CGTCGCCACC
CGCGACAGAT ATGGCTTTGA CGGCCTCGGC CTGACCGTTA TCAATCCGTT CGAAATTTGA
|
|---|
| Protein sequence | MIVLDTNVVS EGLRPKPNLG VRDWLDTQPA DALFICAPVL AEIRFGIERL DAGVQRQTLL
AWAARLESET FFDHILPFDA AAATIYGRIA AQRQSAGRPI GIVDCMIAAI ALAHQAAVAT
RDRYGFDGLG LTVINPFEI
|
|---|
| |