| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0803 |
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| Symbol | def |
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| ID | 3969875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 888558 |
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| End bp | 889085 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637923919 |
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| Product | peptide deformylase |
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| Protein accession | YP_530693 |
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| Protein GI | 90422323 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.605811 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTGC GCGAAATCAT CATCATACCA GACAAGCAGC TCCGCTTGAT CTCCAAGCCG
GTCGAGACGG TCAGCGCCGA GGTGCGCCGG CTTGCCGACG ACATGTTCGA GACCATGTAT
GAGGCGCCGG GCATCGGCCT TGCGGCGATC CAGGTGGCGC AGCCGGTGCG GCTGATCACC
ATGGATCTGG TCCGCAAGGA GGGCAACAGC CTGACCGAGC CGCGCGCCTT CATCAACCCG
GAGGTGATTT CGGCGTCCGA GGAGATGAAC GTCTATGAGG AAGGCTGCCT GTCGATCCCG
GAATATTACG CCGAGGTCGA GCGGCCGAAG CAGGTGCGGA TCCGCTACAC CGACCTCGAC
GGCAATGTGA AGGAGGAGGA CGCCGACGGG CTGTTCGCCA CCTGCATCCA GCACGAGATC
GACCACCTCA ACGGCGTCTT GTTCGTCGAT CACATCTCCA AGCTGAAGCG CGCGATGGTG
ATGCGCAAGT TCGAGAAGGC CGCCAAACGG GGCATCAAAT ACGTCTGA
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| Protein sequence | MALREIIIIP DKQLRLISKP VETVSAEVRR LADDMFETMY EAPGIGLAAI QVAQPVRLIT
MDLVRKEGNS LTEPRAFINP EVISASEEMN VYEEGCLSIP EYYAEVERPK QVRIRYTDLD
GNVKEEDADG LFATCIQHEI DHLNGVLFVD HISKLKRAMV MRKFEKAAKR GIKYV
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