Gene RPC_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0780 
Symbol 
ID3969909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp865436 
End bp866323 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID637923895 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_530670 
Protein GI90422300 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.437191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT TTGACGGTGA GCTTTCGCCC GCGTTCGAGA TCGTCGAACC GCAACTGTGG 
CGCGCGCCGA TCATTTTCAA CTCGCCGCAT TCCGGCTCGG TGTATCCGCA GGATTTCCTG
ATCGCCTCGC GAATCGATCT GGCGGCGCTG CGCCGCTCGG AAGATTCGTT CATGGACGAA
TTGATCGCCG GTCTCAGCGA CCGCGGCTTT CCGGTGGTGC GGGTGCATTT CCCGCGCTCC
TATATCGACG TCAACCGCGA ACCCTACGAA CTCGACCCGC GGATGTTCGC CGGCCGGTTG
CCGAGCTTCG CCAATACCCG CTCGATGCGG GTGGCCGGCG GGCTCGGCAC CATCCCCCGG
GTGGTCGGCG ACGGCCAGGA GATCTATCGC GAACGCATCG ACGTCGACGA CGCGCTGGGG
CGCATCGAGG CGCTGTACAA GCCGTATCAC CGCGCGCTGC GCAAGCTGAT CAACAAGGCG
CATCAGCGAT TCGGCGCGGT GATCGTAGTG GATTGTCATT CGATGCCGTC GGTCGGGCTG
TCGCGCGACG AGCCGCGGCG CCCCGACGTG GTGATCGGCG ATCGCTACGG CACCAGCTGC
GTCGCGCTGA TCGCCGACGT GGTGGAGCAG GCCATGACCG CCCGCGGCTA TGCGGTGGGC
CGCAACAAGC CCTATGCCGG CGGCTTCATC ACCGAACATT ACGGCAATCC GTCGAGCGGG
CTGCACGCCG TACAGGTCGA GCTCAACCGC GCGATCTACA TGGACGAACG GCTGCGCGAA
CGCAGCGCGC GGTTCGCTCA GGTGATCGAC GACTTCGCTA TCCTGGCCGA CGCGCTGGCG
GAGATTCCGC TCGGCGATCT CGGCTCGTTT CAGGCCGCGG CGGAGTAG
 
Protein sequence
MSEFDGELSP AFEIVEPQLW RAPIIFNSPH SGSVYPQDFL IASRIDLAAL RRSEDSFMDE 
LIAGLSDRGF PVVRVHFPRS YIDVNREPYE LDPRMFAGRL PSFANTRSMR VAGGLGTIPR
VVGDGQEIYR ERIDVDDALG RIEALYKPYH RALRKLINKA HQRFGAVIVV DCHSMPSVGL
SRDEPRRPDV VIGDRYGTSC VALIADVVEQ AMTARGYAVG RNKPYAGGFI TEHYGNPSSG
LHAVQVELNR AIYMDERLRE RSARFAQVID DFAILADALA EIPLGDLGSF QAAAE