| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0775 |
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| Symbol | |
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| ID | 3969942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 859909 |
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| End bp | 861264 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923890 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_530665 |
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| Protein GI | 90422295 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.73463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCAA TGAGCATCGG CACCACAGCA CGACTGACGG CGATCGCGGC GACGCTTTGC
GGGACGCTCG GCGCGAATCC GGCGTCGGCA CAATCCTCGG GGCCGTTCAG CCTGTTCGAC
AACATTTTCA CCGGCTCGAT CTCGCAAGGC AGCCACACCG CGCCGGTCTG GAGCGGCGAG
GACGGCGCCT CGGGGCATCC CTTGATGACG GCGGCGGCGA TCCGCGAGGC GGCGTCGAAT
TTCGACAATT GCGTTGCCTC GCTGTGGCCG GACGCGGCGC GCCGCGGCAT TTCGCAGGAC
AGCTTCCAAC GCTTCACCGC CGGCCTCGAA CCCGACCTGC GGATCATGGA CCTGATGGAT
TCGCAGCCGG AATTCACCAA GGCGATCTGG GACTATCTCG ACATCCTGGT GAACGACAAC
CGGCTCGCCA AGGGCCGCGA GGTGCTGGCA AAGTACAAGC CGCAATTCGA CGCCGCGGAA
CGCGCCTACG GCGTCGATCG CTACATCATC GCGGCGATCT GGGGCATCGA ATCCAACTAC
TCGACCCAGA TGGGCGACCG CAGCGTGCTG CAATCCACCG CGACCTTGGC CTGCGTCGGC
CGCCGGCAGA AATATTTCCG CGACGAGTTT CTGGTGACGC TGGAGATCCT GCATCGCGGC
GACCTGCGTC CCGAGCAGAT GCGCGGCTCC TGGGCCGGCG CGTTCGGCCC GACGCAATTC
ATGCCGACCG CGTTCAAGCG CTTTGCCGTC GACGCCGACG GCGATGGCCG CCGCGACGTC
GTCGACAACC CCGCCGACCT GATCTTCTCC ACCGCCAACA ACCTGAAGAA AGACGGCTGG
CAGAGCGGCG CCACCTGGGG CTACGAGGTG GTGCTGCCGC AGAACTTCAA TTTCATGCTG
GCCGATCGCG GCAAGGCGGT GAGCATCGCG CAATGGCAGC AGCTCGGCCT CAAGCGTGCC
AATAACCAGC CGTTCCCCAA CCCCGCCGAC AAGGCCTATG TGCTGGCGCC GGCCGGCGCC
GACGGCCCGG GCTTTCTGAT GCTGCAGAAT TTCCGCGTCA TCATGAAATA CAACCCCGCC
GAGGCCTACG CGCTGGCGAT CGGGCATTTC GCCGATCGCT TACGCGGCGG CGCGCCGTTC
ATCCAGCCCT GGCCGCGGCA GGAACGGGTA TTGTCCCGCG CGGAGCGGCT CGAACTGCAG
CAGCTTTTGG TGCAGCGCGG CTATTACCGC GGCGAGCCGG ACGGCCAGAT CGGCGGCCAG
ACCCGCGAAG CGCTGCGCAG CTTCCAGGCC TCGGTCGGCG CGCCGGCGGA CGGGTTTGCG
TCCAGCGACG TGTTGGAAAG GTTGAGGGGG AGGTAG
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| Protein sequence | MRAMSIGTTA RLTAIAATLC GTLGANPASA QSSGPFSLFD NIFTGSISQG SHTAPVWSGE
DGASGHPLMT AAAIREAASN FDNCVASLWP DAARRGISQD SFQRFTAGLE PDLRIMDLMD
SQPEFTKAIW DYLDILVNDN RLAKGREVLA KYKPQFDAAE RAYGVDRYII AAIWGIESNY
STQMGDRSVL QSTATLACVG RRQKYFRDEF LVTLEILHRG DLRPEQMRGS WAGAFGPTQF
MPTAFKRFAV DADGDGRRDV VDNPADLIFS TANNLKKDGW QSGATWGYEV VLPQNFNFML
ADRGKAVSIA QWQQLGLKRA NNQPFPNPAD KAYVLAPAGA DGPGFLMLQN FRVIMKYNPA
EAYALAIGHF ADRLRGGAPF IQPWPRQERV LSRAERLELQ QLLVQRGYYR GEPDGQIGGQ
TREALRSFQA SVGAPADGFA SSDVLERLRG R
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