Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0773 |
Symbol | |
ID | 3969940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 858238 |
End bp | 859083 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637923888 |
Product | methyltransferase type 12 |
Protein accession | YP_530663 |
Protein GI | 90422293 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.876458 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.677345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGACGA TTCGATTTCA TCGAACCAAC CATAACTCGG AATTATCGAT GAATGTTTGG TACAACGAAA CTGGCCGGCC ACTTAGTTCG ACTTCTTGGC TCAATGCTCA TCATCGCGCC AAACTAAAAG AAAGAACGGC ATTTGCTCGT TCATTGTTGG ATATGCGCCC TAGGAGGATC GTTGATTTAG GTTGCGGTCC CGGCTTGTGG CTTGAGACCT TAAACGGCAT CGTTCCTCCA GATTGCGAAT TTGTTGGAAT TGATAGTGAT TCAGCTGCTC TAGACGAAGC AAAATCCCGA GCCAAAGAAT GGGAGCGTTC GGTTCAATTT CTAAATGTTG ACATAGAGAA GAGTTCGCAG AATTTGCCTG AAGCGGATAT GTTTCTCGCC TTCAATCTGT TCCCCTATTT TACTCATCCA GAGAAGGTAT TGACGGCAGT CAAATCAAGA ATTGCCGGTT CGGGAAGATT GGTTATTCGT CAGTATGATG GCGCGCTGCT TCGATTTGGT CCGCTCGACC AAGGGCGGAG AGGTCGAATA GAAATGTCCC TACATACCTC TGTGATGGGC AGTTCTGAAT TCCAGCATTA TGATTTAGAC CGACTATTCC AGTTGTTGGC CTCATCATCT TTCGAAAATA AGCATTTGGA GTTCGAATTG TTTCAAAGGG CGTCCCCTTA TCCTGAGGAT TTCCTACAAT ACGTGAATAA CACGATCGAC TGGATGGCAA GGTATGCTGC TGAAGACGCA TCGGCCGAAT TGAAGCGCTG GCAGTCCGAG TTCCTGTGCA GGGGCAGTCC ACCTTCTTAC TTCGTAGAAG TTGATTTGGT CGGATGGTTG TCGTGA
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Protein sequence | MATIRFHRTN HNSELSMNVW YNETGRPLSS TSWLNAHHRA KLKERTAFAR SLLDMRPRRI VDLGCGPGLW LETLNGIVPP DCEFVGIDSD SAALDEAKSR AKEWERSVQF LNVDIEKSSQ NLPEADMFLA FNLFPYFTHP EKVLTAVKSR IAGSGRLVIR QYDGALLRFG PLDQGRRGRI EMSLHTSVMG SSEFQHYDLD RLFQLLASSS FENKHLEFEL FQRASPYPED FLQYVNNTID WMARYAAEDA SAELKRWQSE FLCRGSPPSY FVEVDLVGWL S
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