Gene RPC_0760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0760 
SymbolgltD 
ID3969927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp837567 
End bp839024 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID637923875 
Productglutamate synthase subunit beta 
Protein accessionYP_530650 
Protein GI90422280 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01317] glutamate synthases, NADH/NADPH, small subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.423731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.395533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGA TCACGGGTTT TCTGGAAATC GACCGGCACG ACCGGCCCTA CGCGCCGGTC 
GCCGAGCGGG TGACGAACTA CAACGAATTC GTCGTGCCTT TGAACGAGAA GGACACCCGC
GACCAGGCCG CGCGCTGCAT GAATTGCGGC ATCCCGTATT GCCACGGCAC CGGCGCGGTG
GCGCCCGGCA CCACCGGCTG CCCGGTCAAC AACCAGATCC CGGATTTCAA CGATCTGGTC
TATCAGGGCA ACTGGCAGGA GGCGTCGCGC AACCTGCACT CCACCAACAA CTTCCCGGAA
TTCACCGGCC GGATTTGTCC GGCGCCGTGC GAAGCCTCCT GCACGCTGAA CATCGACGAC
AACCCGGTCA CCATCAAGAC CATCGAATGC GCCATCGTCG ATCGCGCCTG GGAGAACGGC
TGGCTGAAGC CGGAGCCCGC CGCGGTGAAG AGCGGCAAGA AGGTCGCGGT GGTCGGCGCC
GGCCCCGCCG GGCTCGCCTG CGCCCAGCAG CTGGCGCGCG CCGGCCACGA GGTTCACGTC
TATGAGAAGG CGGCGAAAGC CGGCGGGTTG TTGCGCTACG GCATTCCCGA CTTCAAGATG
GAGAAGCATC TGATCGACCG CCGCGTCGCG CAGATGGAAG GCGAAGGCGT CACCTTCCAC
TACAATGCCC CGGTCGGCGG CTCCGCCCCC GGCGCGGTCG ATGCCAAGCA GATTCTCAAG
GACTATGACG CGGTGGCGCT GACCGGCGGC TCGGAAGCGC CGCGCGATCT GCCGATCCCC
GGCCGCGAAC TCAGCGGCAT CCACTTCGCG ATGGATTTTC TCACCCAGCA GAACCGCCGG
GTGTCGGGCG AGTCGCTCGG CGACAAGCAA GAGATTCTGG CCACCGGCAA GCATGTCGTG
GTGATCGGCG GCGGCGACAC CGGCTCGGAC TGCATCGGCA CCTCGTTCCG CCAGGGCGCC
AAGTCGGTCA CCCAGATCGA GATCATGCCG GCGCCGCCGG AGCGCGAGAA CAAGGCGCTG
ACCTGGCCGA ACTGGCCGCA GAAGATGCGC ACCTCGTCGA GCCAGGCCGA GGGCGCGGCG
CGCGACTTCG CGGTGCTGAC GCAAGCCTTC GAAGGCACCG GCGGCAAAGT CGGCAAGCTG
CATTGCGTCC GCGTCGACAG CAAATTCCAG CCGCTGCCCG GCACCGAATT CGAACTGAAG
GCCGATCTCG TGCTGCTGGC GATGGGCTTC GTGCATCCGG TGCATGACGG GCTGTTGAAG
TCGCTCGGCG TCGATCTCGA CCCGCGCGGC AACGTCAACG CCACCACCTC CGACTTCCAG
ACCTCGGTGC CGAAAGTGTT CGCCTCCGGC GACATGCGCC GCGGCCAATC CCTCGTCGTC
TGGGCGATCC GCGAAGGCCG GCTGTGCGCC CGCGCCATCG ACCAGGCCCT GATGGGCCTG
ACCACGCTGC CGAGGTAG
 
Protein sequence
MGKITGFLEI DRHDRPYAPV AERVTNYNEF VVPLNEKDTR DQAARCMNCG IPYCHGTGAV 
APGTTGCPVN NQIPDFNDLV YQGNWQEASR NLHSTNNFPE FTGRICPAPC EASCTLNIDD
NPVTIKTIEC AIVDRAWENG WLKPEPAAVK SGKKVAVVGA GPAGLACAQQ LARAGHEVHV
YEKAAKAGGL LRYGIPDFKM EKHLIDRRVA QMEGEGVTFH YNAPVGGSAP GAVDAKQILK
DYDAVALTGG SEAPRDLPIP GRELSGIHFA MDFLTQQNRR VSGESLGDKQ EILATGKHVV
VIGGGDTGSD CIGTSFRQGA KSVTQIEIMP APPERENKAL TWPNWPQKMR TSSSQAEGAA
RDFAVLTQAF EGTGGKVGKL HCVRVDSKFQ PLPGTEFELK ADLVLLAMGF VHPVHDGLLK
SLGVDLDPRG NVNATTSDFQ TSVPKVFASG DMRRGQSLVV WAIREGRLCA RAIDQALMGL
TTLPR