Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0760 |
Symbol | gltD |
ID | 3969927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 837567 |
End bp | 839024 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923875 |
Product | glutamate synthase subunit beta |
Protein accession | YP_530650 |
Protein GI | 90422280 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.423731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.395533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGA TCACGGGTTT TCTGGAAATC GACCGGCACG ACCGGCCCTA CGCGCCGGTC GCCGAGCGGG TGACGAACTA CAACGAATTC GTCGTGCCTT TGAACGAGAA GGACACCCGC GACCAGGCCG CGCGCTGCAT GAATTGCGGC ATCCCGTATT GCCACGGCAC CGGCGCGGTG GCGCCCGGCA CCACCGGCTG CCCGGTCAAC AACCAGATCC CGGATTTCAA CGATCTGGTC TATCAGGGCA ACTGGCAGGA GGCGTCGCGC AACCTGCACT CCACCAACAA CTTCCCGGAA TTCACCGGCC GGATTTGTCC GGCGCCGTGC GAAGCCTCCT GCACGCTGAA CATCGACGAC AACCCGGTCA CCATCAAGAC CATCGAATGC GCCATCGTCG ATCGCGCCTG GGAGAACGGC TGGCTGAAGC CGGAGCCCGC CGCGGTGAAG AGCGGCAAGA AGGTCGCGGT GGTCGGCGCC GGCCCCGCCG GGCTCGCCTG CGCCCAGCAG CTGGCGCGCG CCGGCCACGA GGTTCACGTC TATGAGAAGG CGGCGAAAGC CGGCGGGTTG TTGCGCTACG GCATTCCCGA CTTCAAGATG GAGAAGCATC TGATCGACCG CCGCGTCGCG CAGATGGAAG GCGAAGGCGT CACCTTCCAC TACAATGCCC CGGTCGGCGG CTCCGCCCCC GGCGCGGTCG ATGCCAAGCA GATTCTCAAG GACTATGACG CGGTGGCGCT GACCGGCGGC TCGGAAGCGC CGCGCGATCT GCCGATCCCC GGCCGCGAAC TCAGCGGCAT CCACTTCGCG ATGGATTTTC TCACCCAGCA GAACCGCCGG GTGTCGGGCG AGTCGCTCGG CGACAAGCAA GAGATTCTGG CCACCGGCAA GCATGTCGTG GTGATCGGCG GCGGCGACAC CGGCTCGGAC TGCATCGGCA CCTCGTTCCG CCAGGGCGCC AAGTCGGTCA CCCAGATCGA GATCATGCCG GCGCCGCCGG AGCGCGAGAA CAAGGCGCTG ACCTGGCCGA ACTGGCCGCA GAAGATGCGC ACCTCGTCGA GCCAGGCCGA GGGCGCGGCG CGCGACTTCG CGGTGCTGAC GCAAGCCTTC GAAGGCACCG GCGGCAAAGT CGGCAAGCTG CATTGCGTCC GCGTCGACAG CAAATTCCAG CCGCTGCCCG GCACCGAATT CGAACTGAAG GCCGATCTCG TGCTGCTGGC GATGGGCTTC GTGCATCCGG TGCATGACGG GCTGTTGAAG TCGCTCGGCG TCGATCTCGA CCCGCGCGGC AACGTCAACG CCACCACCTC CGACTTCCAG ACCTCGGTGC CGAAAGTGTT CGCCTCCGGC GACATGCGCC GCGGCCAATC CCTCGTCGTC TGGGCGATCC GCGAAGGCCG GCTGTGCGCC CGCGCCATCG ACCAGGCCCT GATGGGCCTG ACCACGCTGC CGAGGTAG
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Protein sequence | MGKITGFLEI DRHDRPYAPV AERVTNYNEF VVPLNEKDTR DQAARCMNCG IPYCHGTGAV APGTTGCPVN NQIPDFNDLV YQGNWQEASR NLHSTNNFPE FTGRICPAPC EASCTLNIDD NPVTIKTIEC AIVDRAWENG WLKPEPAAVK SGKKVAVVGA GPAGLACAQQ LARAGHEVHV YEKAAKAGGL LRYGIPDFKM EKHLIDRRVA QMEGEGVTFH YNAPVGGSAP GAVDAKQILK DYDAVALTGG SEAPRDLPIP GRELSGIHFA MDFLTQQNRR VSGESLGDKQ EILATGKHVV VIGGGDTGSD CIGTSFRQGA KSVTQIEIMP APPERENKAL TWPNWPQKMR TSSSQAEGAA RDFAVLTQAF EGTGGKVGKL HCVRVDSKFQ PLPGTEFELK ADLVLLAMGF VHPVHDGLLK SLGVDLDPRG NVNATTSDFQ TSVPKVFASG DMRRGQSLVV WAIREGRLCA RAIDQALMGL TTLPR
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