Gene RPC_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0754 
Symbol 
ID3969979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp831578 
End bp832312 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content63% 
IMG OID637923869 
Productbeta-lactamase-like 
Protein accessionYP_530644 
Protein GI90422274 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0374984 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.146735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGC GCTTTGTCGG CTGCGGCGAT GCGTTCGGCT CCGGCGGCCG GCTCAACACC 
TGTTTTCACG TCAGCGGCGA ACAGGTCAAT TTCCTGATCG ATTGCGGCGC CTCGTCGCTG
CCGGCGCTGA AACGCTACGG CATCCTGCGC GACGACATCG ATCTCGTCCT GATCACGCAT
TTCCACGCCG ACCATTTCGG CGGGGTGCCG TTCCTGTTGC TCGAGGCGCA GTTCGGCAAG
CGCAAGCGGC CCTTGGTGAT CGCCGGACCG CCCGGCATCG AATTGCGGCT GACTCGGCTG
ATGGAAGCGA TGTTCGAGCA TTCCTCGTCG ACCAAGCAGC ATTTCGAGCT CTCGGTGGTG
GCCATCGAAC CGAACGAGAC CCGCGAATTC GGCGCGGTGA AGGTCAGCGC ATTTCCGGTG
GTGCACGGCG ATTCCGGCGG GCCGTTCCAT GCCTATCGGA TCGAGGCGGA GGGCCGCACG
CTGGCTTACA GCGGCGACAC CCAATGGACC GAGACGCTAG TCGGAGCCGG CCACGATGCC
GATCTGTTGA TCGCCGAAGC CTATACCTAC GACCGGCCGG TGAAGAACCA TCTCAGCCTG
AAGACGCTGG AAACCCATCT GCCGGAGATC AATCCGCGGC GGCTGATCCT CACCCATATG
AGCGACGAGA TGCTGCGCAA GCTCGATGCG GTGCCGCACA CCGCCGCCAG CGACGGGCTG
ATCGTCGAGT TGTAG
 
Protein sequence
MQLRFVGCGD AFGSGGRLNT CFHVSGEQVN FLIDCGASSL PALKRYGILR DDIDLVLITH 
FHADHFGGVP FLLLEAQFGK RKRPLVIAGP PGIELRLTRL MEAMFEHSSS TKQHFELSVV
AIEPNETREF GAVKVSAFPV VHGDSGGPFH AYRIEAEGRT LAYSGDTQWT ETLVGAGHDA
DLLIAEAYTY DRPVKNHLSL KTLETHLPEI NPRRLILTHM SDEMLRKLDA VPHTAASDGL
IVEL