Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0754 |
Symbol | |
ID | 3969979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 831578 |
End bp | 832312 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637923869 |
Product | beta-lactamase-like |
Protein accession | YP_530644 |
Protein GI | 90422274 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0374984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.146735 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGC GCTTTGTCGG CTGCGGCGAT GCGTTCGGCT CCGGCGGCCG GCTCAACACC TGTTTTCACG TCAGCGGCGA ACAGGTCAAT TTCCTGATCG ATTGCGGCGC CTCGTCGCTG CCGGCGCTGA AACGCTACGG CATCCTGCGC GACGACATCG ATCTCGTCCT GATCACGCAT TTCCACGCCG ACCATTTCGG CGGGGTGCCG TTCCTGTTGC TCGAGGCGCA GTTCGGCAAG CGCAAGCGGC CCTTGGTGAT CGCCGGACCG CCCGGCATCG AATTGCGGCT GACTCGGCTG ATGGAAGCGA TGTTCGAGCA TTCCTCGTCG ACCAAGCAGC ATTTCGAGCT CTCGGTGGTG GCCATCGAAC CGAACGAGAC CCGCGAATTC GGCGCGGTGA AGGTCAGCGC ATTTCCGGTG GTGCACGGCG ATTCCGGCGG GCCGTTCCAT GCCTATCGGA TCGAGGCGGA GGGCCGCACG CTGGCTTACA GCGGCGACAC CCAATGGACC GAGACGCTAG TCGGAGCCGG CCACGATGCC GATCTGTTGA TCGCCGAAGC CTATACCTAC GACCGGCCGG TGAAGAACCA TCTCAGCCTG AAGACGCTGG AAACCCATCT GCCGGAGATC AATCCGCGGC GGCTGATCCT CACCCATATG AGCGACGAGA TGCTGCGCAA GCTCGATGCG GTGCCGCACA CCGCCGCCAG CGACGGGCTG ATCGTCGAGT TGTAG
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Protein sequence | MQLRFVGCGD AFGSGGRLNT CFHVSGEQVN FLIDCGASSL PALKRYGILR DDIDLVLITH FHADHFGGVP FLLLEAQFGK RKRPLVIAGP PGIELRLTRL MEAMFEHSSS TKQHFELSVV AIEPNETREF GAVKVSAFPV VHGDSGGPFH AYRIEAEGRT LAYSGDTQWT ETLVGAGHDA DLLIAEAYTY DRPVKNHLSL KTLETHLPEI NPRRLILTHM SDEMLRKLDA VPHTAASDGL IVEL
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