| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0753 |
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| Symbol | |
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| ID | 3969978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 830214 |
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| End bp | 831539 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923868 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_530643 |
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| Protein GI | 90422273 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.10371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGTCGG GCGCCAACGT CAGCCACCGG CGGGTGTTCG CCATCGCCGG TCCGGCGATG
CTGGCCAATC TTACCACGCC GCTCCTGGGC ATCGTCTCCA CCGCCGCGAT TGGGCGGCTC
GGCGATCCGC ATCTGCTTGG CGGCGTCGCT TTGGCGTCGG CGGCGTTCGA CTGCCTGTTC
TGGCTGTTCG GCTTCCTGCG GATGGCGACG GTGGCGTTCA CCGCGCAGGC GCTGGGCGCC
GGCGACCGCG ACGAGGTCCG CGCCGTGGGC TTGCGCGCGC TGCTGCTCGG CGGCGCCATC
GGGCTCATCC TGATCGCACT GCAGGTCCCG CTGGCGGCGG CGATCTTCCG CCTGATGGGC
GGCAGCGAAG CTGTCACCAC CGCGGCGCGC GAATATTTCT TCATCCGGCT GTGGTCGGCG
CCGATGATCA TGGGCAACTA CGTCGTGCTC GGCTGGCTGA TCGGCCAGGC GCGGCCGCGG
CTGGCGCTGG CGATCCAGGT CGGCATCAAC CTGATCAATA TCGGCTTCAC GCTGTTGCTG
GTGCTCGGGA TCGGCAAGGG CATCGCCGGA GCCGCGATCG CCACCGTGAT CGCCGAAGGT
TGCGGCCTGA TCGCCGGGCT GAGCATCGCC TGGTCGATCC TCGGCGGCCG GATCGGCGTG
CCGCGGCATC TGCTGTTCGA CCGTACCCGG TTGTCGCGGA TGCTGGTGGT CAACCGCGAC
ATCCTGATCC GGACCGCGGC GCTGATAGCG GCGTTCCTGT TCTTCACCGC GCAGAGCGCG
CAGGCCGGCG ACCTCACGCT GGCCGCCAAC GCGGTGCTGT ACAACTTCCT GATGATCGGC
TCGTTCTTTC TCGACGGCCT CGCCAACGCC GCCGAGCAGC TCTGCGGCCA GAGCTTCGGT
GCCCGCGATC GCGCCGCCTT CGGCAAGGCC GTCAAACTGG TGCTGGGCTG GAGCGCGCTG
TTCGGCATCG CGGTCACCGG GCTGTTCGCG ATCACCGGCA ATGCGCTGAT CGAGGTGGTC
ACCACCAGCC CGGAGGTGCG TCGCGCGGCG CGTGAGTTCA TGCTGCTGGC GGCGTTGGCG
CCGGCTTGCG GCGTGATGGC CTATTGCTAC GACGGCATCT ATATCGGCGC CTCCTGGGCG
CGGGAGATGC GCAACCTGAT GCTGGTCGCG TTCGCGGCCT ACCTTGCCGC CTGGTATCTG
CTGATCCCGC TCGGCAATGC CGGGCTGTGG ATCGCCTTCC TGTCGTTCCT GCTGATCCGC
GGCCTGCTGC AGGCCTGGCG CTATCCGGCT ATGGTACGGG TATCGTTTCC TCGCGGAAAA
CCCTAG
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| Protein sequence | MSSGANVSHR RVFAIAGPAM LANLTTPLLG IVSTAAIGRL GDPHLLGGVA LASAAFDCLF
WLFGFLRMAT VAFTAQALGA GDRDEVRAVG LRALLLGGAI GLILIALQVP LAAAIFRLMG
GSEAVTTAAR EYFFIRLWSA PMIMGNYVVL GWLIGQARPR LALAIQVGIN LINIGFTLLL
VLGIGKGIAG AAIATVIAEG CGLIAGLSIA WSILGGRIGV PRHLLFDRTR LSRMLVVNRD
ILIRTAALIA AFLFFTAQSA QAGDLTLAAN AVLYNFLMIG SFFLDGLANA AEQLCGQSFG
ARDRAAFGKA VKLVLGWSAL FGIAVTGLFA ITGNALIEVV TTSPEVRRAA REFMLLAALA
PACGVMAYCY DGIYIGASWA REMRNLMLVA FAAYLAAWYL LIPLGNAGLW IAFLSFLLIR
GLLQAWRYPA MVRVSFPRGK P
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