| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0751 |
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| Symbol | |
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| ID | 3969976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 828091 |
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| End bp | 829827 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923866 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_530641 |
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| Protein GI | 90422271 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.280099 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCT TCGCCGAACT GCTCGATCGC CTCGCCTATG AGCCCGGCCG CAACGCCAAG
CTGCGGTTGA TCACCAGCTA TCTGCACGGC ACCGAAGATC CCGACCGCGG CTACGCGTTG
GCGGCGCTGA CCGGGGCGCT GTCGTTCAAG CACGCCAAGT CGGGGCTGAT CCGCGAACTG
ATCGCCGCGC GGACCGACCC GGTGCTGTTC GCATTGTCCT ACGATTACGT CGGCGATCTG
TCGGAAACCG TGGCGCTGAT GTGGCCCACG TCCTTCTCCC CTCCGCAACG CGACGTGTCC
GTCTTCCCTC CCCGCAAGGG GGAGGGAGCA GGCCGTGCAC TTAGCGCGCG CAATGACCCG
ACGCCGACGC TGACCGAAGT CGTCACGACC CTCGCGACGC TCGGCAAGGC TGAACTGCCG
GCGCAGTTGG CGCGCTGGCT CGACGAACTC GACGAGACCG GGCGCTGGGC TATCTTGAAG
CTCGTCACCG GCAGTCTGCG GATCGGCATC TCGGCGCGGC TGGCGAAGAC CGCGGCCGCA
GCCCTCGGTA ACAAGGATCC GCACGACCTC GAACTGATCT GGCCGGGGCT CGCGCCGCCC
TATCTCGAAT TGTTCGCCTG GCTGGAAGGC CGCGCCGAAA AACCGATCAA TGCCGATCCG
GCGCCGTTTC GGCCGGTGAT GCTGGCCCAT GCCATTGAGG ACGCCGACTT CAACACGCTC
GACGCCGCCG ATTACATCGC CGAATGGAAA TGGGATGGCA TCCGGGTTCA GGCGGTCAGC
GGTCGTGACC AACACGGCCA CCTCATCTCG CGGCTGTATT CGCGGACTGG CGAGGACATC
TCCCAGAGCT TTCCGGATCT GTTGCCGTCG CTGCGGCGGC CCGGCGCGAT CGACGGTGAA
CTTCTGGTCT TGCGCGAAAA CCGCGTGCAG TCGTTTAACG TGCTGCAGCA GCGGCTCAAC
CGCAAGAGCG TGACGCCGAA GCTCTTGAAG GACTATCCGA TCCACCTCCG CGCCTACGAC
CTGCTCGGCG ACGGCGAGGT GGATCTGCGC ACGCTGCCGT TCGAACAGCG TCGCGCGAGG
CTCGAATGCT TTATCGCCGA ATTGAACGAT CGGCGCATCG ACCTGTCGGC GACGATCCCG
TTCGCCGATT GGCAGGCGCT CACCGCGGCG CGCCAAGCTC CGGCCAACGC CGGAGCCGGT
CTCGACGCCG CCGCGGTCGA GGGCGTGATG CTGAAGCGCC GCGACGCGCC GTATCTGCCG
GGCCGGCCGA AGGGGCAATG GTGGAAGTGG AAGCACGACC CGCACGTCAT CGACGCGGTG
CTGATGTATG CGCAGCGCGG CCATGGCAAG CGCTCGTCGT ATTATTCCGA CTATACCTTC
GGGGTGTGGA CGAGCGGCGA AGGCGGCGAC GTGCTGGTGC CGGTCGGCAA GGCGTATTTC
GGGTTCACCG ACGAAGAGTT GCTGCAGATC GACCGCTTCG TCCGCCGCAA CACCACCGAG
AAATTCGGCC CGGTCCGCCA TGTGGTGCAC GAGCCCGATC AAGGCCTGGT GCTGGAAGTG
GCGTTCGAGG GCTTGGCGCG CTCGCCGCGG CACAAATCCG GGGTGGCGAT GCGGTTTCCG
CGGATCAGCC GGCTGCGCTG GGACAAGCCG CCGCGCGACG CCGATCGCCT GGAGACGCTG
CAACGGCTAT TGACCGCGGA GGCCGCAATT CCGCCCGCCG CGGCGTCCGG CCATTGA
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| Protein sequence | MNRFAELLDR LAYEPGRNAK LRLITSYLHG TEDPDRGYAL AALTGALSFK HAKSGLIREL
IAARTDPVLF ALSYDYVGDL SETVALMWPT SFSPPQRDVS VFPPRKGEGA GRALSARNDP
TPTLTEVVTT LATLGKAELP AQLARWLDEL DETGRWAILK LVTGSLRIGI SARLAKTAAA
ALGNKDPHDL ELIWPGLAPP YLELFAWLEG RAEKPINADP APFRPVMLAH AIEDADFNTL
DAADYIAEWK WDGIRVQAVS GRDQHGHLIS RLYSRTGEDI SQSFPDLLPS LRRPGAIDGE
LLVLRENRVQ SFNVLQQRLN RKSVTPKLLK DYPIHLRAYD LLGDGEVDLR TLPFEQRRAR
LECFIAELND RRIDLSATIP FADWQALTAA RQAPANAGAG LDAAAVEGVM LKRRDAPYLP
GRPKGQWWKW KHDPHVIDAV LMYAQRGHGK RSSYYSDYTF GVWTSGEGGD VLVPVGKAYF
GFTDEELLQI DRFVRRNTTE KFGPVRHVVH EPDQGLVLEV AFEGLARSPR HKSGVAMRFP
RISRLRWDKP PRDADRLETL QRLLTAEAAI PPAAASGH
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