| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0747 |
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| Symbol | |
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| ID | 3969972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 821360 |
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| End bp | 824077 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637923862 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_530637 |
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| Protein GI | 90422267 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.5182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCCCG ATGACCCCGT TGTCCCTCTC GATGCGCTGC CCGAGCGGTT CCAGCAATGG
TTCGCGGCGC GTGGCTGGTC GCCGCGCCAG CACCAGCTGG CACTGCTGGC GAAGGCCCGC
GCGCAGCGGT CCGCCCTGTT GATCGCTCCG ACCGGCGCCG GCAAAACCCT GGCGGGGTTT
CTGCCGACGC TGGTGGAGTT GAGCCCGGGC TTGCTCCGCG ACATGCGCGC TCCGCTCCCC
CCGCGAAGCG GGGGGGAGGG GTCGGGGGTG GGGGGTATCG CCGCGGATGC CGCGCGCGCG
GTGAGGCCGA TGCCCCCCAC CCCCGACCCC TCCCCACCAC GCGCTGCGCG CGCGGGGGGA
GGGGAGACGG CTGCTTCTGA ACTGACCGCA TCGATCTCCC TCGGCCGCGG CGTCACCCGT
AGCAGAGGCC TCCACACCCT CTACATCTCG CCGTTGAAGG CGCTGGCAGT CGATATCGCG
CGCAATCTCG AGGCGCCGAT CGCGCAGATG AATCTACCGA TCAAGGTCGA GACCCGCACC
GGCGACACCC CGGTGTCGCG CCGCGGCCGG CAGCGCAAAT ATCCGCCGGA CATCTTGTTG
ACCACGCCGG AGCAGTTGGC GTTGCTGCTC GCCTCCGACG ACGCGCCGTT TCTGTTCGGC
TCGCTCAGGC GCATCGTGCT CGACGAATTG CACGCGCTGG TGACCTCGAA GCGCGGCGAT
CTGTTGTCGC TCGGACTCGC CCGGCTGTGG CGGATCGCGC CGCAGCTGCG CGCCATCGGG
CTGTCGGCGA CGGTGGCCGA GCCGGAGCAG CTGGCCCGCT TTCTGGTGCC GCAGCCGCCT
GGCGAAACCT CCGCCGCCGA CATCGTGGTC GCCGGCGGCG CGGCGCAGCC GATCGTCGAG
ATGCTCGACA GCAAGGAGCG GCTGCCCTGG GCCGGGCATT CGGCGCGCCA CGCGCTGCCG
GAGATCTACG ATCTGATCAG GCGCAACACC ACCACGCTGG TGTTCGTCAA CACCCGCAGC
CAGGCCGAGA TGCTGTTCCA GGAACTCTGG CGCATGAACG ACGACAATCT GGCGATCGCG
CTGCATCACG GCTCGCTCGA CGTCGCGCAG CGCCGCAAGG TCGAGGACGC GATGTCGGCC
GGCAAATTGC GCGGCGTGGT CTGCACCTCG TCGCTCGATC TCGGCGTCGA CTGGGGCGAC
GTCGATCTGG TGATCAATGT CGGCGCGCCG AAAGGATCCT CGCGGCTGAT GCAGCGGATC
GGCCGCGCCA ATCACCGCCT GAACGAAGCC TCGCGCGCGG TGCTGGTGCC GGCCAATCGC
TTCGAAGTGC TGGAATGCCG GGTGGCGATC GACGCCGTCG CGGAGAACGC GCAGGACACC
CCGCCGCTGC GCCTGGGCGC GCTCGACGTG CTGGCGCAGC ACGTGCTCGG CTGCGCCTGC
GGCGCGCCGT TTGCCGCCGA CGAACTGTAT GAAGAAGTGC GGACCGCCGC GCCCTATGCC
GACCTCACGC GAGCGGATTT CGACGACACC ATCGATTTTG TAGCCTGCGG CGGCTACGCG
CTGAAGGTCT ACGAGCGCTT CGCCCGCATC AAGCAGGACA AGGCCGGGCA ATGGCGCGTC
ACCAACCCGC GGGTGCGGCA GATGTATCGC CTCAACGTCG GCACCATCGT CGAGGACACC
ATGCTGAAGG TGAAGCTGGT GCGCTCGTCG CGCGACGGCG GCGGCCACAC CGGCGCGCTC
GGCCGCGGCG GCCGGATGCT CGGCCAGATT GAGGAGTATT TCATCGAGCA ATTGCTGATC
GGCGACACCT TCGTGTTCGG CGGCGAGGTG GTGCGCTACG AGTCGCTGGT CGAGGACGTG
GCCTATGTGT CCCGCGCCCA CGACAAGGAC GCCCGCGTGC CGTCCTACAT GGGCGGCAAG
TTTCCGCTCT CGACTTATCT GGCCGAACGG GTCCGCAAGC TGCTCGCCGA CCAGCGCGCC
TGGAGCACCC TGCCCGATCA GGTGCGCGAC TGGCTGTCGC TGCAGGCCTC GCTGTCGCTG
GTGCCGGGCA CGCGTGAACT GGTGGTGGAA ACCTTCCCGC GCGCCAACAA GCTCTATCTG
GTGTGCTACC CGTTCGAGGG CCGGCTCGCG CATCAGACGC TAGGCATGCT GCTGACCCGC
CGCTTGGAAC GCAGTCGCGC GAAACCACTC GGCTTCGTCG CCAATGAATA TGCGCTGGCG
GTGTGGTGCC TCGGCGACCT ATCGCAGATG GTGCGCCGTG GCGAACTCGA TCTCGACGCG
CTGTTCGATC CCGACATGCT CGGCGACGAT CTCGAAGCCT GGCTTGCGGA ATCCGCGTTG
ATGAAGCGCA CCTTCCGCAG TTGCGCGGTG ATCTCCGGGC TGATCCCGCG GCGCTTCACC
GGCGAGGAAA AGAGCAAGCG GCAGGTGCTG TTCTCCACCG ATCTGGTCTA CGACGTGCTG
CGCAAGCATC AGCCGGATCA TCTGCTCTTA CGGGCGGCGC GCGCCGATGC GGCCACCGGC
CTGCTCGATA TCCGCCGGCT CGGTGATATG CTCCAGCGCA TCAAGGGCCG CATCGTCCAC
AAGGAACTCG ACCGGGTGTC GCCGCTGGCG GTGCCGGTGA TGCTGGAAAT CGGCCGCGAA
GCGGTGTACG GCGAAGCTTC CGACGAACTG CTGGCCGAAG CCGCCGAGGA TCTGGTGCGC
GAGGCGATGG GTGATTGA
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| Protein sequence | MPPDDPVVPL DALPERFQQW FAARGWSPRQ HQLALLAKAR AQRSALLIAP TGAGKTLAGF
LPTLVELSPG LLRDMRAPLP PRSGGEGSGV GGIAADAARA VRPMPPTPDP SPPRAARAGG
GETAASELTA SISLGRGVTR SRGLHTLYIS PLKALAVDIA RNLEAPIAQM NLPIKVETRT
GDTPVSRRGR QRKYPPDILL TTPEQLALLL ASDDAPFLFG SLRRIVLDEL HALVTSKRGD
LLSLGLARLW RIAPQLRAIG LSATVAEPEQ LARFLVPQPP GETSAADIVV AGGAAQPIVE
MLDSKERLPW AGHSARHALP EIYDLIRRNT TTLVFVNTRS QAEMLFQELW RMNDDNLAIA
LHHGSLDVAQ RRKVEDAMSA GKLRGVVCTS SLDLGVDWGD VDLVINVGAP KGSSRLMQRI
GRANHRLNEA SRAVLVPANR FEVLECRVAI DAVAENAQDT PPLRLGALDV LAQHVLGCAC
GAPFAADELY EEVRTAAPYA DLTRADFDDT IDFVACGGYA LKVYERFARI KQDKAGQWRV
TNPRVRQMYR LNVGTIVEDT MLKVKLVRSS RDGGGHTGAL GRGGRMLGQI EEYFIEQLLI
GDTFVFGGEV VRYESLVEDV AYVSRAHDKD ARVPSYMGGK FPLSTYLAER VRKLLADQRA
WSTLPDQVRD WLSLQASLSL VPGTRELVVE TFPRANKLYL VCYPFEGRLA HQTLGMLLTR
RLERSRAKPL GFVANEYALA VWCLGDLSQM VRRGELDLDA LFDPDMLGDD LEAWLAESAL
MKRTFRSCAV ISGLIPRRFT GEEKSKRQVL FSTDLVYDVL RKHQPDHLLL RAARADAATG
LLDIRRLGDM LQRIKGRIVH KELDRVSPLA VPVMLEIGRE AVYGEASDEL LAEAAEDLVR
EAMGD
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