| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0735 |
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| Symbol | |
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| ID | 3970557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 804661 |
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| End bp | 806877 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923850 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_530625 |
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| Protein GI | 90422255 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.211682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCA AGAATTTCAC GATCGAGACC GACGCCGACG GCATCGCGCT GCTGACCTGG
GACAGTCCCG GCCGTTCGAT GAACGTGCTG GACGTCACCA GCATCGAAGA GCTCGGCGCC
ATCGTCGACC AGACCACCGC CGACGCCGCG GTCAAGGGCG TGGTGATCAC CTCCGGCAAG
GAGGCGTTCT GCGCCGGCGC CGATCTGGCG ATGTTGGAAG CTCTGAACAA GCAGTTTGCC
GAGGCCCGCA AGTCCAAAGG CGAAGACGCC GCGCAAAACA TGTTGTTCGA CGAGAGCCGT
AAGCTGTCGC AGATCCTGCG CAAGCTGGAG ACTTCCGGCA AGCCGTGGGT CGCGGCGATC
AACGGCCTCG CGCTCGGCGG CGGCTTCGAA GTGACGCTGG CCTGCCATCA CCGCATCGCC
GCCGACAATC CGAAGACCAA ACTCGGCCTG CCGGAGATCA AGGTCGGGCT GTTCCCGGGC
GGCGGCGGCA CCCAGCGGCT GCCGCGCATT CTGCAGCCGG CCGACGCCAT GCAGATGCTG
CTGAAGGGCG AGCAGGTCAA TCTCGCCAAA GCGAAAGCTT CGAAGATCGT CGACGCCATC
GTGCCGGCGG CGGATTTGAT CCAGGCCGCC AAGGATTGGA TCAAGGGCGG CGGCAAGGCC
ATCGCACCCT GGGACGAGAA GGGCTTCAAG CTGCCCGGCG GCCCGGTGTT CTCCAAGCAG
GGCATGATGA TCTTCCCGGC CGGCAACGCG ATCTATCGCC GCGAAACCTA CGACAACTAT
CCCGCCGCCC GCGCCATCAT GAGCTGCGCC TATGAGGGCC TGTTGCTGCC GATCGACGCC
GCGTTGCGCG TCGAGTCGCG CTACTTCGCC CACATCCTGC AGACCAAGGA GGCCGCGGCG
ATGATCCGCA GCCTGTTCAT CTCGATGCAG GAATTGAACA AGGGCGCGCG GCGGCCGCAA
AACGTGCCGC CGACCAAGGT CAAGAAGCTC GCGATCATCG GCGCCGGCTT CATGGGCGCC
AGCGTCGGCT ACGTCTCCGC CAAGGGCGGC ATCGAGGTGG TGCTGATCGA CCGCGATCAG
GACAGCGCCG ACAAGGGCAA GGCGCATTGC AAGAGCGTGA TCGACGGGCT GATCGCCAAG
GGCCGCGCCA AGGAAGCCGA CCGCGACGCG ATTCTGGGCC GGATCACCGC GACCCCGGAC
TACAATGCGA TCAAGGATTG CGACCTCGTC ATCGAGGCGG TGTTCGAGGA TCGCAAGGTC
AAGGCCGAGA CCTACGCCAA GGCGCAGCCG CTGCTCAAGG AAGGCGCGAT CTTCGCCTCC
AACACCTCGA CGCTGCCGAT CACCTCGCTG GCCGAAGAGT TCCAGGACCA GTCGCGCTTC
ATCGGCATCC ATTTCTTCTC GCCGGTCGAG AAGATGATGC TGGTGGAAAT CATCGTCGGC
AAGAACACCG GTGACGTCGC ACTCGCCACC GCGCTCGACT ACGTCCGCCA GATCAGCAAG
ACCCCGATCG TGGTCAATGA CAGTCGCGGC TTCTTCGCCA ACCGCTGCGT GCTGCGCTTC
ACCGCCGAGG GCCTGGAAAT GCTGATGGAA GGCATTCCGC CGGCGATGAT CGAGAACGTC
GCCAAGATGG CCGGCATGCC GGTCGGCCCG CTGTCGCTCG CCGACGAAGT GGCGCTCGAT
CTGGTGCTGA AGATCATGAA GGCCACCGAG GCCGATCTCG GCGAACAGGC GGTCGATCAG
CAGCAGAAGA AGCTGATGAT CGAACTGGTC GAGAAGCAGG GCCGGTTCGG CCGCAAGAAC
GCCAAGGGGT TTTATGACTA TCCGGAGAAG GGCAAGGGCC AGAAGAGCCT GTGGGCCGGC
ATCGCCGCGC TGCAGCCGAA GCATCTCGAT CCGGATACGA TCGACATCGA GGAATTGAAG
CAGCGCTTTT TGGTGGTGCA GGCGGTCGAA GCCGCGCGCA CCGTCGAGGA TCACGTCATC
ACCGATCCGC GCGAGGCCGA CGTCGGCTCG ATCCTCGGCT TCGGCTTCGC CCCGTTCACC
GGCGGCACGC TGAGCTATAT CGACTTCATG GGCACCAAAG AGTTCGTGGC GCTGTGCCAC
AAGCTGGAGG CCAAATACGG CTCGCGCTTC ACCCCGCCGA AACTTCTGGA AGACATGGCG
AAGACCGGCG AGACCTTCTA CGGCCGCTTC CCACCGAAGA AGCTGGCGGC GGCGTAA
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| Protein sequence | MAFKNFTIET DADGIALLTW DSPGRSMNVL DVTSIEELGA IVDQTTADAA VKGVVITSGK
EAFCAGADLA MLEALNKQFA EARKSKGEDA AQNMLFDESR KLSQILRKLE TSGKPWVAAI
NGLALGGGFE VTLACHHRIA ADNPKTKLGL PEIKVGLFPG GGGTQRLPRI LQPADAMQML
LKGEQVNLAK AKASKIVDAI VPAADLIQAA KDWIKGGGKA IAPWDEKGFK LPGGPVFSKQ
GMMIFPAGNA IYRRETYDNY PAARAIMSCA YEGLLLPIDA ALRVESRYFA HILQTKEAAA
MIRSLFISMQ ELNKGARRPQ NVPPTKVKKL AIIGAGFMGA SVGYVSAKGG IEVVLIDRDQ
DSADKGKAHC KSVIDGLIAK GRAKEADRDA ILGRITATPD YNAIKDCDLV IEAVFEDRKV
KAETYAKAQP LLKEGAIFAS NTSTLPITSL AEEFQDQSRF IGIHFFSPVE KMMLVEIIVG
KNTGDVALAT ALDYVRQISK TPIVVNDSRG FFANRCVLRF TAEGLEMLME GIPPAMIENV
AKMAGMPVGP LSLADEVALD LVLKIMKATE ADLGEQAVDQ QQKKLMIELV EKQGRFGRKN
AKGFYDYPEK GKGQKSLWAG IAALQPKHLD PDTIDIEELK QRFLVVQAVE AARTVEDHVI
TDPREADVGS ILGFGFAPFT GGTLSYIDFM GTKEFVALCH KLEAKYGSRF TPPKLLEDMA
KTGETFYGRF PPKKLAAA
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