| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0704 |
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| Symbol | |
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| ID | 3970565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 769663 |
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| End bp | 774735 |
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| Gene Length | 5073 bp |
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| Protein Length | 1690 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637923820 |
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| Product | pyruvate flavodoxin/ferredoxin oxidoreductase-like |
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| Protein accession | YP_530595 |
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| Protein GI | 90422225 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.311885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.460699 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CGTCGTTCGC AATTGCGAAG CGGCGATCGC GGCTCGTTCA GTTGGCAATA
AATAAGAATG GACGGACGGC AATGAACGCA AAATATCCCG GCATCTCGAC AGTGATCCAC
GGTAACGGCG CCGTCGCCCA GGTGATGGGC CATGTCTGCG GCGGCGTGAT CGGCTACCCG
ATCACCCCCT CGACCGAAAT TTCCGAGATC TACGAGGCGT TCCGCTCCTC CGGCGGCTGC
AACGTCTTCG GCAAGCACCC GTTCTTCTTC GAGCCCGAGG GCGAGCATTC GGCGCAGTCC
GGCGCGCTCG GCGCCTCCTT GACCGGCGGC AAGTTCGTCT CCAACGCCTC CTCCAGCCAG
GGCATCCTGT ACGGCCTGGA ATCGCACTAC GTGACGGTGG GCAAGAAGGT CGGCGGCTTC
GTGCTGCAGG TCGCCGCCCG CGTGGTGTCG AAGCATTCGC TCAACGTGAT GGCCGGCCAT
GACGACGTCT ATGCGCTGCT GTCGTCGGGC TACACCATCC TGTTCGGCTC CAACCCGCAG
CAGGCCGCCG ATCTCGCGGC GATCTCCTAT AAAGTCAGCG CCACCTCGCT GATCCCGGTC
GCCAACGCGA TGGACGGCTT CGCCACCTCG CACATGCTCA GCGAAGCCCT GATGCCGGAG
CCGGAATTGC TGCGCGAATT CCTCGGCGAC CCGGCCGGCC GCATCAAGTG CCCGACCGTC
GCTCAGGAGA TGCTGTTCGG CGCCAAGGGC CGGGTGTTCC AGCTGAAGCA ATACCTCGCC
CGCCACAAGG CGGATTTCAT CGGCTCCGAT CTCGACGCGC TGACCGCGCA TCTCGACGCG
CACGCCGATG CCATCGAAAC CGACAACGAC GCGGCGCTGG TCGAAGCCAC CCAGCAATGG
GTGCCGGAAG AGCTGCAGGG TCAGTGGAAG CGGCAGTGGG TCAACGCGCC CGAGAAGGGC
ACCCGCCAAT TGGTGCCGGC GCTGGTCGAT ATCGACAATC CCGGCCTCAC CGGCGGCGTG
CAGAACCAGC CGGACTTCCA GGCCGGCGCG GTCGATCACC GCACCCATTT CGCCAATGCG
GTGCCGCACT TCGTCAAACA GGCGATGGAC GAATATTCAG CGCTGACCGG CCGCGAATAT
AAGCCGGTGA TGAGCTTCAT GGCCGACGAC GCCGACCATG TGGTGGTGGG CTTAGGCTCG
GTGACCGACG ACGCCGAGGC GGTGGCGAGC TATCTGCGGA GCAAAGGCAA GAAGGTCGGC
GTGGTGTCGA TCAAATTGCT GCAGCCGTTC CCGGAAGGCG ATCTGGTCGC GGCCTTGGCC
GGCAAAAAGT CCGTCACCGT GCTGGAGCGC TCGGAAGTCA CCGCGCTGAC CAGCTTGGTG
ACGCAGGCGC TGTGCAAGGC GCGCGAGAAC GCCGACGGCG TCCGCCACGC CGGGATTCCG
CCGATCAAGC AATTGCCGAA GCTCACCACC GCGATCTTCG GGCTCGGCGG CCACGACCTG
CAGCCGCGCG ACATGATCGC CTGCTACGCC AACATGGAGA AGAAGGACTC CGCGCCGTTC
GTCTATCTCG GCACGCAGTT CTTCACCAAG GATGCCTCGC CGCGGATGAC GGCGCTGCAG
GATCGGCTGA AGGCGGCCTA TCCGGAAACC GAATTCATGG CGCTGCAGAC CGGGCAAAAC
CCGAACCTGC TGCCGCCGCA GGCGTTCCGC ATCCGTTTCC ACTCGATCGG CGGCTACGGC
ACCATCGCCT CCGGCAAGCT GTTGACCGAC ATTCTCGCCG GTGCGCTCGA CATGCACTCG
AAGTCCGCGC CGAAATACGG TTCGGAAAAG AGCGGTGCGC CGACCAACTA TTACATCACG
CTGTCGCCGG AGACAGTGAA AATCACCAAC GCCGAATTGG AAGACGTCGA GATCGTGATC
TCGCCGGACC ACAAGGTGTT CATCCACACC AATCCGTTGC GCGGCCTGGT CGAAGGCGGC
ACCTTCATCC TGCAGACCAA TCTGACGGCG CTCGAAGTCT GGCGCGAGCT GCCGGCCAAG
ATCCGCGCCA CCATCCGTAA CAAGAAGATC AAGTTCTACG TGATCGACGC CTTCGCGGTC
GCCAAGCGCC ACGCGCCGAC CGCCGAACTG GAAACCCGCA TGATGGGCAT CGCCTTCATC
GGCGCGGTGT GCGGCAACGT CGATCGCGTG GTGGCGGACG CCTCGCAGGA AGCCATGCTG
ACCAAGATCC GCCAGCAGAT CTCCAAGAAG TTCGGCGCCA AGGGCGGCGC GGTGGTCGAA
GGCAACATGG CGGTGATCCG CGAAGGTGTC GAAGCCACTC ACAAGGTCGA CTACGACGCC
CCCGACTTCG CCGAAAGCGC AATCGCCGCG GCGCCGAAGG CCAAGCGCGA CGCCTCGCTG
TCGGCCTCGA TGTGCCGCGC CGCGGGCCCG GCCTCGGCCG CGGGCTTCCT CGATCCGGAA
TATTACGACG ACGTGCTGGG CGCCCCGTTC CGCGACGGCA CCATCGCGGA TGCGCCGGTG
CTGCCCGGCA TGGGCATGTT CATGCCGGCG GGCTCCGCCG CGATGAAGGA CAAGGGTCTG
TTCCGCCGCA ACGTGCCGCA GTTCAACCCG GATCAATGCA CCGGCTGTCT GGAATGCGCG
CTGGTCTGCC CGGACGCCGC GATCCCCAAC ACCGTGCACG ACATCCACGA GCTGATTGCC
ACCGCGATCA AGCAGCTCGA TATCGCCCCG GCGCAGCGCG ACGCGCTCTC CGCGCAGGTC
CGCGACCTCA GCGAAGCGGT GCGCGAGATC TATCGCACCA GCAAGGACAA CACCCCGTTC
CATGCCATCG TGGCGCAGGC CGCGGCCTCG CTCGATATCG ACAACGCCAC CTTGAAGCGC
AACCTCGGCA GGCTCGCAGC TGCCCTCGAA GTCTATCCGG TGGCGCGCAC CCGACCGTAT
TTCGACGCCA TGGAGAAGGC GCAGCCGGGC TCCGGCGGGC TGTATTCGGT CTCGGTCGAT
CCGTGGAAGT GCACCGGCTG TCTGGAATGC GTCGATGTCT GCGGACCCGG CGCGCTGGTC
GATCGCGAAC AGGACGAGCC GCTGCTGGAG GAATTGCAGG CCCGGTTCGA ATTCTTCAGC
CACACGCCGA ACACCCCGGC GCGGTTCGTC GACGGCGCCA CCCAGCCCGG CGGCGAGGCC
AAGCGGCTGA TCCTCGACCG CGCCAATTAC TACGCCACCA CCGGCGGCCA CGGCGCCTGC
CGCGGCTGCG GCGAGGTCAC GGCGATCCGG CTGGTCACCG CGACCAACCA CGCGCTGCAC
GACAAGCGAC GCAAGGACCA CACCCGCGAG CTGGAAGCTT TGATCGGCGA ACTCACCGCC
AAGCGCGACG CGGTGGCGGC GAAGGGCGAC GACGCGCCCC GGGTCGCACG GCTCGACCGC
ACGCTGAAGA CGCTGGAAAA GCGGCTCTAT CTCTATGAGA GCGGCCCGAC CGGCAACGGC
CCGGCCGGCA TGGTGATCGC CAACGCGACC GGCTGCTCCA GCGTCTATGC CTCGACCTTC
CCGTTCAACC CCTACACCGA TCCGTGGGTC AACAGCCTGT TCCAGGATAC GCCGGCGGTC
GCCAAGGGCA TCTTCGAAGG CCTCACCGCC ACCGCGTCGG AAGATTTCGC CGCGCTGCGC
ATCGCCAGAC TGGAATTGCA GGACGCCTAC AATCCGGCCA AGCACGACAA TCAGTTCCGT
TACTTCGGCT GGGCCTCGTT CACGCCGGAG GAACGCGCGC TGCTGCCGAC CGTGCTCAGC
ATGGGCGGCG ACGGCGCCAC CTACGACATC GGCTTCGGCG CGCTGTCGCG GCTGTTGTCG
ACCGCGACGC CGATCAAGGT GGTGGTGCTG AACACCGGCG CCTATTCCAA CACCGGCGGG
CAGACCTCCA CGGCGAGCCT CACCGGCCAG GATTCCGACC TGTCGCGGTT CGGCGTCGCC
AATACCGGCA AGCAGGAATC CCGCAAGGAG CTTGGCCTGA TCGCCTCGTT CCATCCCAAC
GTATTCGTGG TGCAGACCTC GACCGCGCTG CAGGGCCACT TCCTGAAGAA CGTGCTGGAG
TATCTCAACT ACAGCGACTC GCCGGCGGTG CTCGACGTCT ATACGCCGTG CCAGGCCGAG
CATGGCATCG GCGACGCGGT CGCCAACCGC CAGGCCCGCA AGGCGGTGGA AAGCCGGATG
AACCCGGTGT TCGTGCACGA CCCGCGCCGC GGCTCCAACC TGCACAGCGC GTTCTCGCTC
GACGGCAACC CGGAGCCCGA TCAGGACTGG GCGGCGCAGT CGATCGAATA TGTCGACGAC
AACGGCGCCA CCCAACTGCT CAAGACCGCG GTGACGCCGG CCGACTTCGC CTACACCGAG
GTGCGCTTCA AGAAGCAGTT CAAGAAGCTA GCCGCCGACG CCGATGGCGT CGTGGTGCAG
GACTATGTGG CGCTCAGCCC CGACCAGCGC GTCGGCAAGA CGCCGTTCAT CTACGCCACC
GACGCCGACA AGCGGCTGAT CAAGCTTTCG GTCGGCGCCG CGGTGATCCG GCTGGTCGAG
GAGCGGCGCA AATATTGGCG CACGCTGCAG TTCCTCAGCG GCCTCGACGT TCGCCAGATC
GACGAGACCC ACCGCGTCGA ACTCGACGCG CTGCTGCGGC AATACGAAGA CTCGCTGAAG
GCGCGGGAAA CCTCGCTGGA TTCGATCGCC CGCGGCATGA GCGAACTCGC CGCGTCGTCG
AATGCACCCG CCGCCGGCGG CTTCGCCGGA CTGATGGCGG GGCTGGCCCC GGCCGCGGCG
GCACCTGCCA CCAACGGCGC CAAGGCGCCG ATCACCAGCG GCAACGTGCC GATCACCATC
TCCGAAGATG ATCTCGCCAA GTGCACCAAC TGCAAGAGCT GCTACCAGGA CGTCGGCGAG
GTGTTCGAGC CGACCAAGAT CGTGGTCGAC GGCGTCACCA AGGACGTCGC CCATGTGATC
CCGGGCGTGT TCGGCAAACT CAAGATTACG CCTGAACTGT CGGCCAAGCT GAGCCGGGCG
GCGGCGAATT GCGACGCGGA GATCATCCGA TGA
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| Protein sequence | MAEASFAIAK RRSRLVQLAI NKNGRTAMNA KYPGISTVIH GNGAVAQVMG HVCGGVIGYP
ITPSTEISEI YEAFRSSGGC NVFGKHPFFF EPEGEHSAQS GALGASLTGG KFVSNASSSQ
GILYGLESHY VTVGKKVGGF VLQVAARVVS KHSLNVMAGH DDVYALLSSG YTILFGSNPQ
QAADLAAISY KVSATSLIPV ANAMDGFATS HMLSEALMPE PELLREFLGD PAGRIKCPTV
AQEMLFGAKG RVFQLKQYLA RHKADFIGSD LDALTAHLDA HADAIETDND AALVEATQQW
VPEELQGQWK RQWVNAPEKG TRQLVPALVD IDNPGLTGGV QNQPDFQAGA VDHRTHFANA
VPHFVKQAMD EYSALTGREY KPVMSFMADD ADHVVVGLGS VTDDAEAVAS YLRSKGKKVG
VVSIKLLQPF PEGDLVAALA GKKSVTVLER SEVTALTSLV TQALCKAREN ADGVRHAGIP
PIKQLPKLTT AIFGLGGHDL QPRDMIACYA NMEKKDSAPF VYLGTQFFTK DASPRMTALQ
DRLKAAYPET EFMALQTGQN PNLLPPQAFR IRFHSIGGYG TIASGKLLTD ILAGALDMHS
KSAPKYGSEK SGAPTNYYIT LSPETVKITN AELEDVEIVI SPDHKVFIHT NPLRGLVEGG
TFILQTNLTA LEVWRELPAK IRATIRNKKI KFYVIDAFAV AKRHAPTAEL ETRMMGIAFI
GAVCGNVDRV VADASQEAML TKIRQQISKK FGAKGGAVVE GNMAVIREGV EATHKVDYDA
PDFAESAIAA APKAKRDASL SASMCRAAGP ASAAGFLDPE YYDDVLGAPF RDGTIADAPV
LPGMGMFMPA GSAAMKDKGL FRRNVPQFNP DQCTGCLECA LVCPDAAIPN TVHDIHELIA
TAIKQLDIAP AQRDALSAQV RDLSEAVREI YRTSKDNTPF HAIVAQAAAS LDIDNATLKR
NLGRLAAALE VYPVARTRPY FDAMEKAQPG SGGLYSVSVD PWKCTGCLEC VDVCGPGALV
DREQDEPLLE ELQARFEFFS HTPNTPARFV DGATQPGGEA KRLILDRANY YATTGGHGAC
RGCGEVTAIR LVTATNHALH DKRRKDHTRE LEALIGELTA KRDAVAAKGD DAPRVARLDR
TLKTLEKRLY LYESGPTGNG PAGMVIANAT GCSSVYASTF PFNPYTDPWV NSLFQDTPAV
AKGIFEGLTA TASEDFAALR IARLELQDAY NPAKHDNQFR YFGWASFTPE ERALLPTVLS
MGGDGATYDI GFGALSRLLS TATPIKVVVL NTGAYSNTGG QTSTASLTGQ DSDLSRFGVA
NTGKQESRKE LGLIASFHPN VFVVQTSTAL QGHFLKNVLE YLNYSDSPAV LDVYTPCQAE
HGIGDAVANR QARKAVESRM NPVFVHDPRR GSNLHSAFSL DGNPEPDQDW AAQSIEYVDD
NGATQLLKTA VTPADFAYTE VRFKKQFKKL AADADGVVVQ DYVALSPDQR VGKTPFIYAT
DADKRLIKLS VGAAVIRLVE ERRKYWRTLQ FLSGLDVRQI DETHRVELDA LLRQYEDSLK
ARETSLDSIA RGMSELAASS NAPAAGGFAG LMAGLAPAAA APATNGAKAP ITSGNVPITI
SEDDLAKCTN CKSCYQDVGE VFEPTKIVVD GVTKDVAHVI PGVFGKLKIT PELSAKLSRA
AANCDAEIIR
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