| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0701 |
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| Symbol | |
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| ID | 3970562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 765258 |
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| End bp | 765884 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923817 |
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| Product | autoinducer synthesis protein |
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| Protein accession | YP_530592 |
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| Protein GI | 90422222 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGG TGATCGACCA GGCCAATCAA CTCCGCTACC GCGAAATCTT GGAGCGCCAG
TTCCGCTTCC GCCACGAGAT CTTCGTCAAG GAGCGCGGCT GGACCGACTT CGAGAAGGAC
GGCCGCTACG AGGTCGATCA GTACGACAAC GAGAAGACCG TCTATGTCGT GGCCCTCGAC
GACGAACGGG TGATCGGTTG TTTCCGGCTG TATCCGACGC AGGCGCCGCA CATGCTGAGC
GAGGTCTTTT CCTATCTGGT CGACGGAGCG GTGCCGCAAC GCAGCGATAT GCTGGAAATG
ACCAGGATGT CGGTGTCGCG CGACAGGCGC GGCGGCAGCA CCTACTACGA ACTGCTCGCC
GGACTGCAGG AATACGGCCT GCAACAAGGG CTCTGCGCGG TCACCGCGGT GATCCGTTCG
TTCCGGATGC CGGTGGTGCA GGACGCCGGA TTTCGGGTTC ACCCCTTGGG CCTGCCGCGC
GAGGTCAATG GCGAAACGCT GATGGCGGTG ATGTTCGAGA TCGGCGAGGA CTCGCTGGAG
CGGGTCCGGC GCACCGCAGG CATCGGCGTG CCGGTGCTGG AGCCGATACC GCAACCTGCG
GGCGCATTGC AGCGCAAGCT CGCCTAA
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| Protein sequence | MIRVIDQANQ LRYREILERQ FRFRHEIFVK ERGWTDFEKD GRYEVDQYDN EKTVYVVALD
DERVIGCFRL YPTQAPHMLS EVFSYLVDGA VPQRSDMLEM TRMSVSRDRR GGSTYYELLA
GLQEYGLQQG LCAVTAVIRS FRMPVVQDAG FRVHPLGLPR EVNGETLMAV MFEIGEDSLE
RVRRTAGIGV PVLEPIPQPA GALQRKLA
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