Gene RPC_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0700 
Symbol 
ID3970600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp763602 
End bp764570 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID637923816 
ProductPfkB 
Protein accessionYP_530591 
Protein GI90422221 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1105] Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 
TIGRFAM ID[TIGR03168] hexose kinase, 1-phosphofructokinase family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCCAGA TCGTCACCGT CACGCCCAGC CCCGCCATCG ATGCCTCGAC CTCGGTCGGT 
AAGATTGCTG CTTTCTCCAA GCTACGTTGC GCGCCGCTGC GGCGCCACCC CGGCGGCGGC
GGTATCAACG TCGCGCGGGT CATCCAGCGG CTCGGCGGCG AGGTCCGCGC GGTCTATCCC
AGCGGCGGCG CCACCGGCGA ATTGTTGCGC GAGCTGCTCG ACCGCGAAGG CATCAACGGC
ATCACCGTGG CGGTGGCGGC GGAGACCCGC GAAGATTTCA CGGTGTTCGA GGAGAGCACG
CGGCAGCAAT TCCGCTTCAT GATGCCGGGA TCGCCGCTCG CCGATCCGGA GTGGGCGCAA
CTGATTCAAG CCGCACTGGT GGGGCCGCCC GCCTTCATCA TCGCCAGCGG CAGCGTGCCG
CCCGGCGCGC CGGAGGATTT CTTCGGCCGC ATCGTGCAGG CCGGCAGCGC GCTCGGCGCC
AAGGTCGTGG TCGACACCTC GCGACAGCCG CTGCAGGCCG CGCTGCAGAG CGGCCTGTTC
TTGATCAAGC CGAGCCTCAG CGAATTCTGG AATCTGACCG GCTTGAACTG CGACGACGAC
GCCACGCTGA TCGACGCCGC GCGCGACTTG ATCGATCGCG GCCTGGTGGA GATGGTGGCG
CTCAGCATGG GACCGAACGG CGCGCTGCTG GTCAGCCGCG ACCGCGCGCT GCGCGCCGAA
GGCCTTGCGG TCGAGGCCGC CACCGTGTCC GGCGCCGGCG ACAGCTTCCT GGCGGCAATG
GTGTGGAGCC TGCAAAACGA TCCCGATCTT GCCACCGCGC TGCGCTTCGG CATCGCGGCG
GGCACGGCCG CGTTGGTCAA TCCCGGCACC GAACTGGCGC AGCCGCAGGA TATTGCGAAC
TTCCTGCCGC AGGTCCGCAT CCGCGAGATC GCCGAAGCCG CGCGCGTCGC CACATCGCCG
CTGATTTGA
 
Protein sequence
MSQIVTVTPS PAIDASTSVG KIAAFSKLRC APLRRHPGGG GINVARVIQR LGGEVRAVYP 
SGGATGELLR ELLDREGING ITVAVAAETR EDFTVFEEST RQQFRFMMPG SPLADPEWAQ
LIQAALVGPP AFIIASGSVP PGAPEDFFGR IVQAGSALGA KVVVDTSRQP LQAALQSGLF
LIKPSLSEFW NLTGLNCDDD ATLIDAARDL IDRGLVEMVA LSMGPNGALL VSRDRALRAE
GLAVEAATVS GAGDSFLAAM VWSLQNDPDL ATALRFGIAA GTAALVNPGT ELAQPQDIAN
FLPQVRIREI AEAARVATSP LI