| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0688 |
|---|
| Symbol | |
|---|
| ID | 3970588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 751049 |
|---|
| End bp | 751552 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923804 |
|---|
| Product | phenylacetate-CoA oxygenase, PaaJ subunit |
|---|
| Protein accession | YP_530579 |
|---|
| Protein GI | 90422209 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
|---|
| TIGRFAM ID | [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAGCG CGGCCGGCGA GCTCGGCACG CTGCGGCAAC GCGCCTGGGC CGCTGCCGCC
AATGTGGTCG ATCCGGAGAT TCCGGTGTTG ACCATCGAGG ATCTCGGGGT GCTGCGCGAC
GTCACGGTGA GCGGCGACCG GATCGAGGTG TCGATCACGC CGACCTATTC GGGCTGTCCG
GCGATGACCA TGATCGCGCT AGAAATCGAA CTGGCACTGG CCCGCGAGGG CATCGCCGGC
GCCAAGATCA CCACCGTGCT GTCGCCGGCC TGGACCACCG ACTGGATGAG CGACGCTGGC
CGCCGCAAGC TGCGTGACTA CGGCATCGCG CCGCCGCTAT CGGGCGGCGG TCGCCGCGCG
CTGTTCGGCG AACAACAGGT CGCCTGCCCG CAATGCGGCT CGATCGCGAC GACCGTGCTG
TCGGAATTCG GCTCGACCTC GTGCAAGGCG CTGTGGCGCT GCCTGGATTG TCGCGAACCG
TTCGATTACT TCAAGTGTCA CTAG
|
|---|
| Protein sequence | MVSAAGELGT LRQRAWAAAA NVVDPEIPVL TIEDLGVLRD VTVSGDRIEV SITPTYSGCP
AMTMIALEIE LALAREGIAG AKITTVLSPA WTTDWMSDAG RRKLRDYGIA PPLSGGGRRA
LFGEQQVACP QCGSIATTVL SEFGSTSCKA LWRCLDCREP FDYFKCH
|
|---|
| |