Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0679 |
Symbol | |
ID | 3970618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 741172 |
End bp | 742044 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637923795 |
Product | inner-membrane translocator |
Protein accession | YP_530570 |
Protein GI | 90422200 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.796058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT TCCTGCAATT CTTGGTGTCC GGACTGACGG TCGGCGCGGT CTATGCGCTG GTCGCGCTCG GCTTCACGCT GATCTACAAC GCCTCCGACG TGGTGAATTT CGCGCAAGGC GAGTTCGTGA TGCTGGGCGG CATGGTGACG GTGTTCGCCT CGGCCGCAGG CGTGCCGCTG CCGCTCGCTG CCTTGATCGC GATCGGCGTT GCCGTGGCGG TCGGGCTGTT GCTGTATTGG TGCGCGATCG CGCCGGCGCG CGGCGCTTCC GCGGTGTCGC TGATCATCAT CACCATCGGC GCCTCGATCC TGCTGCGCGG CGCGGCGCAG ATCGTGTTCG ACAAGCAGTT CCATAAATTG CCGTCGTTCT CCGGCGACGC GCCGGTCGGC CTGTTCGGCG CCGCGGTGCA GCCGCAAAGC TTCTGGGTGC TCGGCGGCAC CGCGGTGATC GTGCTGCTGC TGTATTTGTT CATGGAACGC ACGCTGCTCG GCAAGGCGGT GGTGGCGACC GCCGCCAACC GGCTCGCCGC CAAGCTGGTC GGCATCAACA CTTCCACGGT CATGGCGCTG GCGTTCGGCG GCTCGGCGGC AATCGGCGCC ATCGCCGGCA TTTTGATTAC CCCGATCACG CTGACCAGCT ACGACGTCGG CACGTTGTTG GCGCTGAAGG GCTTTGCCGC GGCGATGCTC GGCGGCATGG GCAATCCGCT CGGCGCGGTC GCCGGCGGCC TGCTGCTCGG CCTGTTGGAG GCCTTCGGCG CCGGCTATCT CAGCTCGACC TACAAAGACG CTTTCGCCTT CCTGGTCATT CTCGGCGTGC TGTTCGCCGC GCCGCAGGGC CTGTTCGGCC GCCGCGGCGT CGACCGGGTC TGA
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Protein sequence | MAEFLQFLVS GLTVGAVYAL VALGFTLIYN ASDVVNFAQG EFVMLGGMVT VFASAAGVPL PLAALIAIGV AVAVGLLLYW CAIAPARGAS AVSLIIITIG ASILLRGAAQ IVFDKQFHKL PSFSGDAPVG LFGAAVQPQS FWVLGGTAVI VLLLYLFMER TLLGKAVVAT AANRLAAKLV GINTSTVMAL AFGGSAAIGA IAGILITPIT LTSYDVGTLL ALKGFAAAML GGMGNPLGAV AGGLLLGLLE AFGAGYLSST YKDAFAFLVI LGVLFAAPQG LFGRRGVDRV
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