Gene RPC_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0679 
Symbol 
ID3970618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp741172 
End bp742044 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID637923795 
Productinner-membrane translocator 
Protein accessionYP_530570 
Protein GI90422200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.796058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAT TCCTGCAATT CTTGGTGTCC GGACTGACGG TCGGCGCGGT CTATGCGCTG 
GTCGCGCTCG GCTTCACGCT GATCTACAAC GCCTCCGACG TGGTGAATTT CGCGCAAGGC
GAGTTCGTGA TGCTGGGCGG CATGGTGACG GTGTTCGCCT CGGCCGCAGG CGTGCCGCTG
CCGCTCGCTG CCTTGATCGC GATCGGCGTT GCCGTGGCGG TCGGGCTGTT GCTGTATTGG
TGCGCGATCG CGCCGGCGCG CGGCGCTTCC GCGGTGTCGC TGATCATCAT CACCATCGGC
GCCTCGATCC TGCTGCGCGG CGCGGCGCAG ATCGTGTTCG ACAAGCAGTT CCATAAATTG
CCGTCGTTCT CCGGCGACGC GCCGGTCGGC CTGTTCGGCG CCGCGGTGCA GCCGCAAAGC
TTCTGGGTGC TCGGCGGCAC CGCGGTGATC GTGCTGCTGC TGTATTTGTT CATGGAACGC
ACGCTGCTCG GCAAGGCGGT GGTGGCGACC GCCGCCAACC GGCTCGCCGC CAAGCTGGTC
GGCATCAACA CTTCCACGGT CATGGCGCTG GCGTTCGGCG GCTCGGCGGC AATCGGCGCC
ATCGCCGGCA TTTTGATTAC CCCGATCACG CTGACCAGCT ACGACGTCGG CACGTTGTTG
GCGCTGAAGG GCTTTGCCGC GGCGATGCTC GGCGGCATGG GCAATCCGCT CGGCGCGGTC
GCCGGCGGCC TGCTGCTCGG CCTGTTGGAG GCCTTCGGCG CCGGCTATCT CAGCTCGACC
TACAAAGACG CTTTCGCCTT CCTGGTCATT CTCGGCGTGC TGTTCGCCGC GCCGCAGGGC
CTGTTCGGCC GCCGCGGCGT CGACCGGGTC TGA
 
Protein sequence
MAEFLQFLVS GLTVGAVYAL VALGFTLIYN ASDVVNFAQG EFVMLGGMVT VFASAAGVPL 
PLAALIAIGV AVAVGLLLYW CAIAPARGAS AVSLIIITIG ASILLRGAAQ IVFDKQFHKL
PSFSGDAPVG LFGAAVQPQS FWVLGGTAVI VLLLYLFMER TLLGKAVVAT AANRLAAKLV
GINTSTVMAL AFGGSAAIGA IAGILITPIT LTSYDVGTLL ALKGFAAAML GGMGNPLGAV
AGGLLLGLLE AFGAGYLSST YKDAFAFLVI LGVLFAAPQG LFGRRGVDRV