| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0675 |
|---|
| Symbol | |
|---|
| ID | 3970614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 737810 |
|---|
| End bp | 738724 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637923791 |
|---|
| Product | WecB/TagA/CpsF family glycosyl transferase |
|---|
| Protein accession | YP_530566 |
|---|
| Protein GI | 90422196 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
|---|
| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0700348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC AGCCCGACTC CGACAATCGA TGGATTGAAG ATGCGGTTGC TTTGGAGCAG
CGCGCACCCG ACCGCCGTGA GGCCGCCTTC GATGCGACTC GCGCCGCCGC GGCGATCGAG
CGGCGACTGG CCGGCGACCG CCGAAAGAAC CGTTTCCGGA ATTGGCGCCG CATCAACGTC
GGCGGCTTGC CCGTTGCGGT GGTGGACACC CAGGAGTCCG CCAAGGCGAT TGTCGACGAG
GCGCTGGAAC GGCGCGGCCT TTGGCGATAT CCCGCCTATA TCACCTCCAC CAACGGCGAA
GTGACGTCGC GCGTCGCGTT CGATGAGCAA GAGCGCTCGT TGTTCCTGGA GGCGGATGCG
ATTCACGCCG ACGGCATGCC GCATGTGTTC GCTTCACGCA TGAAGTGCGA GGTTGCGCTT
CCGGAACGCG TCGCCACCAC CGATCTGTTC TTCGACGTCG CAGCCGAAGC TTGTAGTCGC
GGTGCGACGA TGTTTCTGCT CGGCGCCACC GAAGTCGCGA ACAACCTCGC CGTGGAGCGC
ATCCGCGCGC AGTTTCCGGG GATCAAGCTG GTCGGACATC GCCACGGCTT CTTTGCCGAC
GAGCAGGAAG AAATCGCGGC CTGCGCCGAG ATCGCGGCGC TGCAGCCGGA TATTCTTTGG
GTCTCGATGG GGGTGCCGCG CGAGCAGATG TTCGTGGTCC GACACCGCAG CCGATTGACC
TCGGTGGGGG TGATCAAGAC CTCGGGGGGA TTGTTCGATT TCCTGTCGGG CTTGAAGCCG
CGGGCTCCGC AATGGATGCA GGCGATCGGG CTGGAATGGC TGTGGCGGGC GGCGCTCGAG
CCGAAGCGGC TCGGCTGGCG CTACCTCAAG ACCAACCCGA TGGCGCTGTA TTTGCTGCTG
ACCAAATCGA AGTAG
|
|---|
| Protein sequence | MSKQPDSDNR WIEDAVALEQ RAPDRREAAF DATRAAAAIE RRLAGDRRKN RFRNWRRINV
GGLPVAVVDT QESAKAIVDE ALERRGLWRY PAYITSTNGE VTSRVAFDEQ ERSLFLEADA
IHADGMPHVF ASRMKCEVAL PERVATTDLF FDVAAEACSR GATMFLLGAT EVANNLAVER
IRAQFPGIKL VGHRHGFFAD EQEEIAACAE IAALQPDILW VSMGVPREQM FVVRHRSRLT
SVGVIKTSGG LFDFLSGLKP RAPQWMQAIG LEWLWRAALE PKRLGWRYLK TNPMALYLLL
TKSK
|
|---|
| |