| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0671 |
|---|
| Symbol | |
|---|
| ID | 3970610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 731667 |
|---|
| End bp | 732593 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637923787 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_530562 |
|---|
| Protein GI | 90422192 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.744983 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCC CCGTCCGACC CGCGGTGAGC CTTTGCATTC CGACGTTCCG TCGTCCCGAC
GGCTTGCGGA AGTTGCTGTC GCATCTTGCC GCGCTGGACT ACCAGGGGCC GCTCAGCATC
ACCGTGGTCG ATAATGACGG CGAGCGTCGC GCCGGCGAGG CGGTGGTGCA CGAGATCGCC
CCGGGGTTCC CGTTTCCGAT CGCATGCCTC GTGGAACCGC GCCGCGGTCA CACCTACGCC
TACAACACCG GTTTTGCCGC CGCCTGCCGC ACCCCGGGCA CCGATTATGT CGCAGTGCTC
GACGACGACG AATATCCGTC GCCAGGCTGG CTGACCGAGA TGATCGCTGT CGCCGTGCAA
TACCAGGTCG ACATCGTCGG CGGCCCGGTG TTCCCGGTGT TCGACGATCC CGCGCATTGG
CTGGCGCGCG GCCAACTCTA CGCGCCGCAG CGCTATCCGA CCGGCCCGGT GCCGATGATC
TACGGCGCCG GCAACATGCT GATCCGCCGC GCCACGCTCG AACACTATCT CGACGAGCCG
TTCTCCCACG CCTTCGCCTT CACCGGCGGC AGCGACCTGG ATTTCTTCAA GCGCTGCGCC
CGCGACGGAC GCTCATTCGC CTGGGCGGAC CGCGCCGAGG TGTTCGAAAC CACGCCGAAA
TCGCGGATGA CGGTGTCCTG GTTGCTGCTG CGGGCGTTCC GGATCGGCTC CGACAACACC
CGGACCGACC GGGTGGCGGC GCGCGGCCCG CGCGATGCCG TGCTGCGCTG GGTCAAGGGC
GCCGGGTTGT TCGGCTACGG CGTTGCGCTG GCACCGTTCG CGCTGCTACG CGGCCGTTGC
GCGATGATCG GCAGCCTGAA GGTGGCGGCC CGCGGCGTCG GCCGGCTCGC CGCGGAATTC
AACGTGTTGT ACGAAGAATA TCGCTGA
|
|---|
| Protein sequence | MTPPVRPAVS LCIPTFRRPD GLRKLLSHLA ALDYQGPLSI TVVDNDGERR AGEAVVHEIA
PGFPFPIACL VEPRRGHTYA YNTGFAAACR TPGTDYVAVL DDDEYPSPGW LTEMIAVAVQ
YQVDIVGGPV FPVFDDPAHW LARGQLYAPQ RYPTGPVPMI YGAGNMLIRR ATLEHYLDEP
FSHAFAFTGG SDLDFFKRCA RDGRSFAWAD RAEVFETTPK SRMTVSWLLL RAFRIGSDNT
RTDRVAARGP RDAVLRWVKG AGLFGYGVAL APFALLRGRC AMIGSLKVAA RGVGRLAAEF
NVLYEEYR
|
|---|
| |