| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0665 |
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| Symbol | |
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| ID | 3970604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 724375 |
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| End bp | 725685 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923781 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_530556 |
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| Protein GI | 90422186 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.658587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA TTCGGCGTTT TGAAGTCGTC GCGGTCGTTC AAGCGGCCCT GGATGGACTG
GATGTCCTGG CCTCTGCTCG GTGTCTCGCC GTGGTGGCGT CGCTGCTGTT GGTGTGGGTG
ACGCTGGAGC CGTTTGAGGA CTTGCGCATC GCGACCCTGC CGGGCGCGCC GGCCGGCAAA
TTGGCGTTCA CCTATCTGGC GTTCGGCGCG CTGGCGCTGC TCACCGTGCT GCTGTCGGCC
TCCGACAATA TCCCGGCGCT GAAGTCGCTG TGGACGCCGC TCCACCTCTG CCTGCTCGGA
TGGATGGCGT TCAATATTGC GTTGTCGCAA AGCCCCGGCG TTTCGCTGCA GCGCTTCGTG
CTGACCGCCA GCGTGATCTC GCTGGCGCTG ATGATCCCGC TGTTGCCGCC CACGCAAGCC
GCGTTCAAAT GGTGCTTCGC GGTCGCCGCC TTGCTGCTTC TGGCGCTGTG TTATTTCGGC
CTGGTGGCGG CGCCTGCGCT GGCGATCCAT TCCGCCGCCG ACGTCACCGA ACCCGATCTG
GCGGGAGATT GGCGCGGCAG CTTCGCGCAC AAGAACGCGG CCGCGGCGGT GATGGCGATC
CTGGTCTATC TCGGGCTCTA TCTCGCAACC AACGGGCTGC GTCTGTGGGG CGGATCGATC
GCGGCCCTCG CCGCGCTGTT TCTGGTCGGC TCCGGCGGCA AGAGCGCGCT GGCGTTGTGC
ATCGGGGTCG GCCTGTTGGC CCAACTGATC GCGACCATCA GAAGCCTCTG GCTGAAGATG
CTGGTCTGCC TGGTGCCGGT GGTGCTGATG AATCTGCTGA GCGTCGGCAG CGCGATCAAC
ACCGGCCTGG CGGCCATCGT CGGGCTGCTT CCGATCGATA CCAGCTTCAC CGGGCGAACC
GATATCTGGA AATATGCCTT CGCGGCATTT CTCGATCACC CGTTCCGCGG CTATGGCTAT
GCGGCGTTCT GGGAGAACGC CAACCGCACC TCGGCCGAGG ATCTCGGCTG GGCTTCCACC
TCGCCGCACA GCCACAACAG TTATCTCGAT CTGGCGCTCA CCATCGGTTT GCCCGGGCTG
GTGCTGGTGA TCCTGGTGTT CGTCGTTGCG CCGTTGCGCA ATTTCCACGT CATCCAATCC
GCGGACCGCA GCAGCGGACT GGCCCGGCTG TTCCTGGTGA TCTGGATGTT CGGGGTTTAC
TTCGCCACCA TGGAGACGTT CTTGCTCGAC CGGCAGAATC CGACCTGGTT CAGCTTTGTG
ATCGCGGCCG CCGGCCTGCA CTATCTGGCG AGGTTCGGCG TGAAAGCGTA G
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| Protein sequence | MIDIRRFEVV AVVQAALDGL DVLASARCLA VVASLLLVWV TLEPFEDLRI ATLPGAPAGK
LAFTYLAFGA LALLTVLLSA SDNIPALKSL WTPLHLCLLG WMAFNIALSQ SPGVSLQRFV
LTASVISLAL MIPLLPPTQA AFKWCFAVAA LLLLALCYFG LVAAPALAIH SAADVTEPDL
AGDWRGSFAH KNAAAAVMAI LVYLGLYLAT NGLRLWGGSI AALAALFLVG SGGKSALALC
IGVGLLAQLI ATIRSLWLKM LVCLVPVVLM NLLSVGSAIN TGLAAIVGLL PIDTSFTGRT
DIWKYAFAAF LDHPFRGYGY AAFWENANRT SAEDLGWAST SPHSHNSYLD LALTIGLPGL
VLVILVFVVA PLRNFHVIQS ADRSSGLARL FLVIWMFGVY FATMETFLLD RQNPTWFSFV
IAAAGLHYLA RFGVKA
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