| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0661 |
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| Symbol | |
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| ID | 3970639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 718945 |
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| End bp | 721323 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637923777 |
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| Product | trimethylamine-N-oxide reductase (cytochrome c) |
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| Protein accession | YP_530552 |
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| Protein GI | 90422182 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.117189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCA CACGTAGTAC CTTTATCCGC AGCGTCATTC CCGGCGCGGT CGGACTGGCG
ATGTTTCCCC ACCTCGCGCG CGGCGCTTCC GGCGCCGGCG GCGTCGTCGA CGGTCGAGTG
CTTGTGAACA CCTCGATCGG CCCGATGTTC TTGGTGAAGA AGGGCGGCAA GGTCGTCGGC
GTCGAGCAAC TGAAGCAGGA CGGCGAACCC TGGAAGCTGC TCGGCGACAT GCCGGACCGG
CTCTACAACA AGGCGCGCGT CAAGGCGCCG ATGATCCGCC GCGAATTCCT GAAAAATCGC
GAGAAGAGCG ATCGGACCGA CCGCGGCAGT CGCGACTTCG TCGAAGTGAG CTGGGACGAC
GCGTTGAAGA TCGTCAGCGA GGAAATGCAG CGCATCAAGA CCAAATTCGG TAACGCCTCG
CTGCACCGCG GCAAGAGTTC TTGGGCCTCG AACCACGCGC ATTTCTATCG CACCGAGGCG
CTGCTGCAGC GCTTCCTGAA CGGCTTCGGC GGCTCGTCGA CCTTCTTCGG CAACTACTCG
AACCAAGCCA TCTCGGAGAT CTTGCCGGCG GTTGCCTGGT CAAGTCCGGC TGCGGCGACC
GACTGGCCGG TGATCCATCA GAACGCCAAG CTGATCGTGC TGTGGGGCTG CAATCCGGTG
GCCACCACCC GCATCCTGTC CGGCCGCTAC GCCACGCACG CCTGGTACGA GGCGAAGAAG
CGCGGCATCG AGATCATCGC GATCGACCCG ATGAGGTCGG AGTCGGTGAA AGAACTCGGC
TGCGAGTGGC TGCCGATCCG GCCCAACACC GACGTCGCGC TGGCGCTCGG CCTGATGCAC
ACGCTGCTAA CCGAGAACCT TCAAGACAAG GCGTTCATCG AGGGTTACAC CAAGGGCTTC
AAGGATTTCG AGCCCTATCT CACCGGCGCC AAGGACGGCA CGCCGAAGAC CGCCGAGTGG
GCTTCGGGCA TCACCGGCAT TCCGGCGGAG ACGATCCGCG GCCTCGCCCG CAAGATGGCG
GGCACCCGCA CCACCATTGC CGGCGGCTGG TCGACCCAAC GCCAGCATCA CGGCGAACAG
GCCCCGTGGG CCTTGGTCGC GCTTGGCGCC ATGCTCGGCC AGATGGGGCT TCCCGGTGGT
GGTGTGAGCT TCGGCCTGCA CTATGCCGAC GGCGGATATC CGCGGCCGAC CATGCCGGTG
GTCGGCGGGA TCTCGCCCGG CAGCAATGCG GTGCCGAATC CGTTCCCGAT CGCCTGCCTG
TCGGACGCAT ACTTGAACCC GGGCAAGACC ATCGAGTGCA AAGGGCGCAA GATCACCTAT
CCGGACATTC GTCTCGTCTA TACTTCGGGC GGCAACCAGC TCACCCATCA TCAAGACACC
AACCGGGTGA TCGAAGCCTT CCGCAAGCCG GAGGTGGTGA TCGTGCAGGA TCCTTGGTGG
AGCCCAAGCG CCCGCTTTGC CGATATCGTG CTGCCGGCTT CGAGCGATCT GGAGCGTAAC
GACCTCGGCC AAACCCTCAA CCTCATCACT GCCGCGCATG CGGCCGTCGA TCCGCTGTTC
AAGTCGCGTA CCGACTACGA CATCTTGACC GAACTCGCCG ACCGGCTCGG CCACCGCCAG
GCCTTCACCG AGGGACGCAG CGAGATGGAG TGGGTGCAGT TCTTCTATGA CGCGGCCAAG
GCGCAGTCGA AGGCGGTGAA GATGCCCGAC TTCGACGAGT TCTGGGCGGG CGAGGGGATC
ATCGAATTCC CCGCCGGCAA AGGCGAATTC GTACATTTGG CCGACTTCCG CAACGATCCG
CTGCTGCAGC CGCTGTCGAC TGCCTCCGGC CTCATCGAGT TCGTCTCTCC CTACGTCGGC
AAGCTCGGCT ACGATGACTG CCCGGCGCAT CCGACCTGGA TCGAGCCGGT GGAATGGAAA
GGCAGCAAAG GGGCGGACAA GTTCCCGCTG CAGCTGATCT CTCCCCACCC GCCGCTGCGT
CTGCATTCGC AGATGTGCAA CACCGAGACG CGCAAGAGCT ACACCGTCGC CGACCGCGAA
CCCGTCGTCA TCAACGCCGA CGACGCGGCA AAAAGGGGCA TCAAGAGCGG CGACATCGTG
CGGCTGTTCA ACGACCGCGG CCAAACGCTT GCCGGTGCGA TCGTCACGCC GGACATCCTC
CAAGGCACGA TCTGCCTGCA CGAGGGCGGT TGGTACGACC CGGCTAAGCC CGGCGAGAAG
GGAGCTCTCG ACAAATACGG CTCGCCGAAC CTGCTGACCC TCGACGTGCC GCTGTCCTCG
CGCTTTGCCC AGGCAACCAT TGCGGGCACG GCAATCTGCG ACGTGGAGAA GTGGAAGGGC
GAGGCCCTGC CGGTGACCGC CTTCGACGCC GTCGGCTGA
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| Protein sequence | MSITRSTFIR SVIPGAVGLA MFPHLARGAS GAGGVVDGRV LVNTSIGPMF LVKKGGKVVG
VEQLKQDGEP WKLLGDMPDR LYNKARVKAP MIRREFLKNR EKSDRTDRGS RDFVEVSWDD
ALKIVSEEMQ RIKTKFGNAS LHRGKSSWAS NHAHFYRTEA LLQRFLNGFG GSSTFFGNYS
NQAISEILPA VAWSSPAAAT DWPVIHQNAK LIVLWGCNPV ATTRILSGRY ATHAWYEAKK
RGIEIIAIDP MRSESVKELG CEWLPIRPNT DVALALGLMH TLLTENLQDK AFIEGYTKGF
KDFEPYLTGA KDGTPKTAEW ASGITGIPAE TIRGLARKMA GTRTTIAGGW STQRQHHGEQ
APWALVALGA MLGQMGLPGG GVSFGLHYAD GGYPRPTMPV VGGISPGSNA VPNPFPIACL
SDAYLNPGKT IECKGRKITY PDIRLVYTSG GNQLTHHQDT NRVIEAFRKP EVVIVQDPWW
SPSARFADIV LPASSDLERN DLGQTLNLIT AAHAAVDPLF KSRTDYDILT ELADRLGHRQ
AFTEGRSEME WVQFFYDAAK AQSKAVKMPD FDEFWAGEGI IEFPAGKGEF VHLADFRNDP
LLQPLSTASG LIEFVSPYVG KLGYDDCPAH PTWIEPVEWK GSKGADKFPL QLISPHPPLR
LHSQMCNTET RKSYTVADRE PVVINADDAA KRGIKSGDIV RLFNDRGQTL AGAIVTPDIL
QGTICLHEGG WYDPAKPGEK GALDKYGSPN LLTLDVPLSS RFAQATIAGT AICDVEKWKG
EALPVTAFDA VG
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