Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0660 |
Symbol | |
ID | 3970638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 716421 |
End bp | 718823 |
Gene Length | 2403 bp |
Protein Length | 800 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637923776 |
Product | ApbE-like lipoprotein |
Protein accession | YP_530551 |
Protein GI | 90422181 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0716] Flavodoxins [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.121438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCGC GTCGATATCA CCTCTGGCTC GGCTGCCTCG CCGGTCCCTT TTTGGTGGTG CTCGCCGTCA CCGGCGTCCT GCTTGCGGTC GATGCGCTGT GGGCGCGGGC GACCCAACCC GCCGCAGCGC CTGCCAGCCT GAGCGTCGCC GAGCTTGCCG CGGGCCTTGC CGGCCACGGC ACTCTCGAAC GGTTGGCGGT GACGCCGGTG GGCACGATCG TCGCCCAATT CGCCGCGCCG CGCCGTCGCG CCGCGGTCGA CCCGACCGAT CTGTCGCTTC GCCCGGTCGC GGAGACGGGC GACACGATCC GCACCGCGAC CGAAATCCAC CGCACCCTGA TGATCGGCGA TCGAGGTCGC CTCATCCTGG CCCTCGCCAC ATGCGCGGGC CTGTTGCTCG CGGCAACCGG CCTCGCACGG ATCTGGCGCG GCGAACGTGG CGGCGGGGCG CTGCGGCGCC TGCATCGTGG CCTTGGCCTC ACGTTCGCGC TGCCGTTTGT CGTCTCCGCA GCGACCGGGC TCGGGCTTGC CGTCGCAACC ATCTTTCCCC TCCAGATCGA CGGCATTCGC CCGGCTTTTC CGGCAGCGTT CGCCGAGGGC GACCGGCTGC CGGTCGGCGC GGTCGCGGCG CTGGCGTCGG TTGCGGTCGG CGATCTCGAG GAACTGGTGC TGCCGCGCGC CGACGATGCC AATGACGGTT ATTTTCTGGC GACCGCCGAT CGCTTCGCCT GGATCGATCC GGTGAGCGGC GGTGTTGCGG CGGCGAGCGA GCGCCCGGTG ATGCATCGGC TGGCGGCCGC CGTCCTGCGC TTCCACGCCG GGCGCAGCAT GACGGCGCTG GCTGTCATCT TCGGTCTTGC CGCCGCCGCA GTCGGGTTGC TCGGACTCAC CGGCCTCGCT GTTGGCGGGA TTGCGATCGC GATCCGTCGA CGACGGCCCG TCGTCAGCGG CGCCGCCGCC AAGGCGGATA CCATCATTCT CGTCGGCAGC CAGGGCGGCA CGACATGGGG CTTCGCCGAG CGGTTGGCGG CGCGGCTGAT CGAGGCCGGC CACCTGGTCG ATCTCGCGGC GATGAACAAC CTTGCGTCGG AATATCCGAA AGCCCAGCAG CTCATCGTCC TCACCGCGAC CCACGGTATC GGCGAGCCGC CGGATTCTGC CGACCGGTTT CTCGCGCGCC TGCCGCAGGC GACCCTGCCA CCGGCCTTCG CCGTGCTTGG ATTTGGCGAC CGCGAGGCCA AAGCCTTCTG CGGCTTTGCC GAAGCGGTCG ACGCCGCGTT GCTGGCCACG GGGGCCAAGC CGATGCTGTC GCTCGAGCGC ATTCATCGGC GGTCCGAAAC GGACTATGCG GCCTGGGTCG AGCGGCTGCT TGCCGCGCTC GGTCATGGTC GGCAGGCCAG CCTTCCGACA GACGCGTCGA CTGCTCGCCA ATGGCCGGCG CCCGTGGTCC GCGGATCGCC GACGCGGCGG GTGCTCTCCG GAACGGCGAT GGGCTCGCGT TGGTCGGTGC AGCTTTGGCT GCCGCAGGAT CACGACCTGT CCGATCTCAC GGCGCGTCTT TCGGCCCGTA TCGCCAGGAT CGAAACATCG TTGTCTCGCT TCCGCGGCGA CTCCGAAGTC ATGGCCTTCG ACCGGGCGCC GTGCGACGTG TGGCAATCGG TATCGCGCGA TCTGGCCGAA GTCCTTGCCG TCGGCCTCGA CATCGGGCGT CGCTCGGGCG GGGCCTTCGA CGTCGGGCTC GCAGCCGAAG TGGCGGCCTG TGGTTTCGGC TCCGGGTGGA GCGGCAGCGG CGTGGCGCGG GATCGGATCG TTGCTGCGCA TGAAACGATT GAACTCGATC GCGGCGCTCG GCGGATCCGC AAGCGCGCTG CCGTCTCGCT CGATCTCGCC GGCATTGCCA AGGGCTGGGC GGTCGACGAG CTGTCGCGTC TCGTCGCCGA GGCAGGCTTT CCGGCGCATC TCGTGGCGCT CGACGGCGAG CTCCGCGCCG GCGCCGTGCA GCCGGACGGG CGGCCGTGGG CGATCGGTCT CGAGGCGCCC GCGGTCGGCC GCCGCGCCGT GATCGGCCAC ATCGACCTCA TCAAGCGGTC GGTCGCGACC TCCGGCAACA ATCGCCGCTT CGCTGCGAAC GGCGGCCACA CCCTCGACCC GGCGACCGGA CGCTCGGTCG CCGCTGGGCC GGCCTCGGTG AGCGTGTTCG CTTCGACCTG CATCGTTGCC GACGCCTGGG CGACGGCGCT CATGGTGCGC GGCCGTGATG GCCTCGCCGC AGCGCGGGCT GCCGGCGTTG AAGCCCTGTT CGTAGCGCGC GAACCGCTTG CGATGCCACC GGCGACGCGT GCTGCGCGGT GGCTCGGCGC GCAGCTCTCA AATCACAGGA GGTGCCGCGA CGCACAGCCC TGA
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Protein sequence | MPARRYHLWL GCLAGPFLVV LAVTGVLLAV DALWARATQP AAAPASLSVA ELAAGLAGHG TLERLAVTPV GTIVAQFAAP RRRAAVDPTD LSLRPVAETG DTIRTATEIH RTLMIGDRGR LILALATCAG LLLAATGLAR IWRGERGGGA LRRLHRGLGL TFALPFVVSA ATGLGLAVAT IFPLQIDGIR PAFPAAFAEG DRLPVGAVAA LASVAVGDLE ELVLPRADDA NDGYFLATAD RFAWIDPVSG GVAAASERPV MHRLAAAVLR FHAGRSMTAL AVIFGLAAAA VGLLGLTGLA VGGIAIAIRR RRPVVSGAAA KADTIILVGS QGGTTWGFAE RLAARLIEAG HLVDLAAMNN LASEYPKAQQ LIVLTATHGI GEPPDSADRF LARLPQATLP PAFAVLGFGD REAKAFCGFA EAVDAALLAT GAKPMLSLER IHRRSETDYA AWVERLLAAL GHGRQASLPT DASTARQWPA PVVRGSPTRR VLSGTAMGSR WSVQLWLPQD HDLSDLTARL SARIARIETS LSRFRGDSEV MAFDRAPCDV WQSVSRDLAE VLAVGLDIGR RSGGAFDVGL AAEVAACGFG SGWSGSGVAR DRIVAAHETI ELDRGARRIR KRAAVSLDLA GIAKGWAVDE LSRLVAEAGF PAHLVALDGE LRAGAVQPDG RPWAIGLEAP AVGRRAVIGH IDLIKRSVAT SGNNRRFAAN GGHTLDPATG RSVAAGPASV SVFASTCIVA DAWATALMVR GRDGLAAARA AGVEALFVAR EPLAMPPATR AARWLGAQLS NHRRCRDAQP
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