Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_0656 |
Symbol | |
ID | 3970634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 711352 |
End bp | 712521 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637923772 |
Product | NapC/NirT cytochrome c-like |
Protein accession | YP_530547 |
Protein GI | 90422177 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.57103 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACC CTTTCATCGC AGTCGTTCGA TTCATGAAGA AGCCCGTCGG CCTCGGGGTC GGCGCCTTGA TCGGAGTGGT CGTCGGCGTG GTCGGATGGG GCGGCTTCAA CACCGCCATG GAGGCGACCT CCAGTTTGGA GTTCTGTACG TCTTGTCACG AAATGAGAGA CAATGTCTTT CAGGAGTACA AGAAGACGAT TCACTACTCG AATCCCGCCG GCGTCCGCGC GGTCTGTTCG GACTGCCACG TCCCGAAGGA TTGGAGCCAC AAGATCATTC GCAAGGTCCA GGCTTCCAAG GAGGTCTGGG GCAAGATCAC CGGCGTGATT GATACGCCGG AAAAATTCGA GAGCAAGCGC CTCGAACTCG CCAAACACGA GTGGGCGCGG ATGAAGGCGT CCGACAGCCG GGAGTGCCGC AACTGCCACT CCTTCGAGGC GATGGATTTC ACCCACCAGC GGCCGAAAGC CTCCAAGCAA ATGCAGAAGG CCTTCAAGGA AGGCGGCACT TGCATCGACT GTCATAAGGG CATCGCGCAC AAATTGCCGG ATATGTCGGG CGGCTTCCGC TCCAAGATGA AGGACCTCAA AGCCGAGGGC CTGAAGAACG GCGGCAAGGC GGAGAAGAGC TGGGCGCTCA CCACCTCGCC GGCCTGGGGC GATTTGGACA AGGCCGCCGC CGGCGGTTCG GGTGAAGGCC GCATCCTGCC GGCCGCGCCT GTCACCGTGC TGAAGCTGTC GGGCGATCTT GCTCAAGTCC GCATCGATGG CTGGCAGCAG GCCGGCGCCG AACGGCTGAT CGTCGCGCTG CCCGGCAAGC GGATCATGCT CGCCGCGGTC TCTGCCGCGC TTGCGGAGAC CGCGCAAGTG AAGTCGACCC GCCATGATGA CGAGACCGAC CTCGATTGGA AAGAGGCCTC GATCGTGCTG TGGATGCCGA AGGCCAATCT CACCGCCGAC CAGAAAGCGT TGTGGGCCTA CGGCGAGGAA ATGTTCGACG CGTCCTGCGG CGCCTGTCAT TCGCCAGCTC CTCCCGGCCA TTTCCCGGCG AACCAGTGGG TCGGCATCGT CAACGATATG AAGGCCAACA CCTCGCTCGA GGAAGACGAG GTGCGCTTCC TGCAGGCCTA TCTTCAGAAC CACGCTCAGG ACGTCGTGGG CGGTCACTGA
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Protein sequence | MANPFIAVVR FMKKPVGLGV GALIGVVVGV VGWGGFNTAM EATSSLEFCT SCHEMRDNVF QEYKKTIHYS NPAGVRAVCS DCHVPKDWSH KIIRKVQASK EVWGKITGVI DTPEKFESKR LELAKHEWAR MKASDSRECR NCHSFEAMDF THQRPKASKQ MQKAFKEGGT CIDCHKGIAH KLPDMSGGFR SKMKDLKAEG LKNGGKAEKS WALTTSPAWG DLDKAAAGGS GEGRILPAAP VTVLKLSGDL AQVRIDGWQQ AGAERLIVAL PGKRIMLAAV SAALAETAQV KSTRHDDETD LDWKEASIVL WMPKANLTAD QKALWAYGEE MFDASCGACH SPAPPGHFPA NQWVGIVNDM KANTSLEEDE VRFLQAYLQN HAQDVVGGH
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