| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0654 |
|---|
| Symbol | |
|---|
| ID | 3970632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 707723 |
|---|
| End bp | 710527 |
|---|
| Gene Length | 2805 bp |
|---|
| Protein Length | 934 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637923770 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_530545 |
|---|
| Protein GI | 90422175 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.78924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCC GTTCCGTCTT CCCCAATTCC GTCGCGCGCT CGGTGTTGAT GCTGTCCTGG
ATCGCCGTTC TGGTGATCCT CGGCACCTCG TTACAATTTG CGGTCTCGGC TTGGCGGAAT
GATTTTCGCG CGCGCCAGGT CGTCGATCTC GTGACTCTCG ATCGAACGGT TTTCCAATCG
ACCGCCGAGG TCCGCTTGGA GATCGGCTCG GTGGGCGTCG CGCTGTTGCG CGATGACGAT
CCCAGCGCCG GCGTCCAACT TGGTCTCGGC GCAATGCTCG ATGCCTGGCA GCGGGCGGAG
GCCGCGCTCG CCGCGTCGTC GCTGCCCGAT CGGGACCGGC TGATCGGCCG GCTGTCCCGA
GCGGGAGAGG CGTTCCAGAC GGCGCGGCGC TATGTCGACG CCGAGGCCGC GCTGCCACGC
GCGGAGCGCG ACGCCAATCG CATCGAGCCA TGGCGCATGG CGGTGTATGA TCTCGCCGCC
GCGATCGACG CCCTGGGCAC ATCGGTCGGC CGCGAATTGC GCGCCCACGA TCTGCAGCTC
GGCGAACTGG TCGCCATCCG GCAGATGTCC TTCACCATCC GGGACCGCTA TTCGCGGCAA
TGCTCGGCGT TTCGCCCGGC GGTGCAGCTC GACACGCCGC TGACGCCGGC CGAACGTGAC
CGCTGGCGTG AAGACATCGG GGCCTATGCC GCGCTGTGGG CGCAGATGCA ACGCATCGCC
CTGCAACTGC CTGAAGAAAC CGGATTTGCG CCGCTGGTCG CCGAAGGCCT GAGACGCACC
GAGGCGGCGC AGAGTGTCAT GACCAGGACG CTCGACGGCC TGTCGGGCTC GGGACGGCCG
GCGTTCGACG CCGCGGCCTG GTCGGAGAAC TGCGTTTCCG CCTATTCGTC GATTCTCGGC
GTTGGCAGCC ATGCTCTCGA CCTGGAAACC CGCCGAGCCG ACAACAGCCG TGCGGAAGCC
TTTCGCACCG GCGCAGTTTC AACCGCCGTG CTGCTGCTGG TCGGCGTGCT CGGCTTCATT
TCTCTGAGCT TCGTGCGAAC CCGGCTGTCG GCGCCGATGC GCAACATCGA GGCCGCGCTC
GCCACCCTGC GGGCGGGCGA TCTCGACACG CCGATCCAGG TGCCACGATG GAATGACGAA
CCGAGCGCCA TCATCCGCGC GCTCGAGGGA TTCCGTCTGG AGGCGCTCGA GGCGCGTCGG
ATGCGATTGC GCATCGATCA GACCCGCGAC GAAATGGTCA AACATTCCGA AAAGCTCGGC
CGGACCAAGT CGCAATTCCT CGCCAACATG AGCCATGAAA TCCGCACCCC GCTGCATGGG
ATTCTCGGAA CCGTGCAGCT TCTTGCGCAA AGTCGGGTGA GCGACGAGCA GCGCAGCTGG
GTGCAGGCGC TCGATCAGTC CGGGCGCCTG TTGCGCGATA TCCTCGACGA CATTCTCGAC
TTCACCCGCT TGGAAAGCGG CCGCATTCGG GTCGACACCG CGATGTTCTC GCTCACGGAA
CGCATCGCCA TGGTCAACGC GACGATCCGC GCGTCGATGG AGCGCAAGGG GCTGGACTTC
ACCGTCGAGA TCGATCCGGA GCTGCCCGAG GTGCTCTGCG GCGATGCGGG GAAACTCGGC
CAGATCCTGC TCAATCTTCT CGGCAACGCG GCAAAATTCA CCAAACAAGG CGGTGTTCGT
CTCACTGTCG CCGGCGACGC CGGGCGACCC GACCGGCTGC GCATCACCGT CGCCGACACC
GGCATCGGGA TTGCACCCGA AGCGCTCGCC CACATCTTCG AGCCGTTTTC CCAGGCCGAC
GGATCGGTCG CCCGGCGCTT CGGCGGCTCG GGGCTCGGCC TCGCGGTCTG CCGGGGACTT
CTCGACGCCC TCGGCGGCGA CATCGACCTG CAGACCGAAG TCGGTCGCGG CACCAGCTTC
ACGGTGCTGT TTCCGGTGAG CAGGGGGGAT CACGATGCGG CGCCCGTCGC CGGCGTCGCG
GACGAACTCG TGGACGAACT ACCAAACCTT CATGTGCTCG TGGCCGAGGA CAATCCGGTC
AATGCCCTCA TCGTCCGGAC CATGCTCGAG CGCGACGGCC ATCGGGTCCG TCACGTCGAG
ACCGGCGGAG ACGCGGTTGC GGCGGCCGTG GCGGAGGATT TCGACGTTGT GCTGATGGAT
CTCGCGATGC CCGGTCTCGA TGGGACCAGT GCCTGCCGGC AGATCCGGGC CTGTGGCCAT
CCCACGCGGG CGGTGGTGCC TGTTCTGGCG GTGTCCGCCG GCGGCGCGTC GGCGGACGAC
ATCGATGCCG GTTTCGACGG CCGGCTCGAA AAGCCGTTTC ATCGCGAAGA CCTGTTTTCC
GCCCTTGCCA CGGCCATTGG CCTGAGATCG GTTCGGCGCG CAACGCGGCG GGAGAGCCTG
GGGGCGATCG GCGAGCAGGC GCGCGATCTC GGCGTCGAAG GCGCCCGCAA GCTGGTCTCG
CTCTATCTGA CGTCGCAGCC GCCGTTGCTG GCCAAGACGG TCGCATCGGT GCGGCTTGGC
GATCACGACC AAGCGCGTGT CCTCGCGCAT CGCCTCAGGG GGGCCGCGGC GCATATCGGC
GCCGACGATA TGGCCGCCGC CGCGGCGACG CTCGAACGGG CGGCGGCGGA CGACGGCGCC
ATCGTCGTGG CGGCGGAGGT CCTCGCAAAG CTCGGACAAA CGCATTTCAC GGCTTTCGCG
GCCTATGCGG AGGACGAGCT TGCGGGCGTC TGGAGCAACG CGGCCGCCAA GGATCGCGCG
GCGATCGATC GCGCGTATCA GGCGACCTTT TCGGCGAACA CGTAG
|
|---|
| Protein sequence | MFRRSVFPNS VARSVLMLSW IAVLVILGTS LQFAVSAWRN DFRARQVVDL VTLDRTVFQS
TAEVRLEIGS VGVALLRDDD PSAGVQLGLG AMLDAWQRAE AALAASSLPD RDRLIGRLSR
AGEAFQTARR YVDAEAALPR AERDANRIEP WRMAVYDLAA AIDALGTSVG RELRAHDLQL
GELVAIRQMS FTIRDRYSRQ CSAFRPAVQL DTPLTPAERD RWREDIGAYA ALWAQMQRIA
LQLPEETGFA PLVAEGLRRT EAAQSVMTRT LDGLSGSGRP AFDAAAWSEN CVSAYSSILG
VGSHALDLET RRADNSRAEA FRTGAVSTAV LLLVGVLGFI SLSFVRTRLS APMRNIEAAL
ATLRAGDLDT PIQVPRWNDE PSAIIRALEG FRLEALEARR MRLRIDQTRD EMVKHSEKLG
RTKSQFLANM SHEIRTPLHG ILGTVQLLAQ SRVSDEQRSW VQALDQSGRL LRDILDDILD
FTRLESGRIR VDTAMFSLTE RIAMVNATIR ASMERKGLDF TVEIDPELPE VLCGDAGKLG
QILLNLLGNA AKFTKQGGVR LTVAGDAGRP DRLRITVADT GIGIAPEALA HIFEPFSQAD
GSVARRFGGS GLGLAVCRGL LDALGGDIDL QTEVGRGTSF TVLFPVSRGD HDAAPVAGVA
DELVDELPNL HVLVAEDNPV NALIVRTMLE RDGHRVRHVE TGGDAVAAAV AEDFDVVLMD
LAMPGLDGTS ACRQIRACGH PTRAVVPVLA VSAGGASADD IDAGFDGRLE KPFHREDLFS
ALATAIGLRS VRRATRRESL GAIGEQARDL GVEGARKLVS LYLTSQPPLL AKTVASVRLG
DHDQARVLAH RLRGAAAHIG ADDMAAAAAT LERAAADDGA IVVAAEVLAK LGQTHFTAFA
AYAEDELAGV WSNAAAKDRA AIDRAYQATF SANT
|
|---|
| |