| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0651 |
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| Symbol | |
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| ID | 3970629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 703253 |
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| End bp | 704392 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637923767 |
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| Product | putative ATP-dependent exoDNAse (exonuclease V) alpha subunit |
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| Protein accession | YP_530542 |
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| Protein GI | 90422172 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02686] conjugative relaxase domain, TrwC/TraI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCCT CGATCTCCGC GCGCGGGAAT GCGGCCTCCG CGTTGCGATA TTACGCCCAT
CTGCAGCGCG ACGATTACTA TAGCCGTGAG GGGGAGCCGC CCGGCCGTTG GGCCGGCCGC
GGCGCCGAGC GGCTGAGTCT GGTTGAGCCA GTCACACAGG GCGAATTCGA CGCCGCGCTG
CAAGGCGTCG ATCCCAAAAC CGGGGAGCGG CTCGCACAAA TTGGCGGGCG CGGGCGGGAG
CATTCCGCCG GCTGGGACAT GACCTTCAGC GCCCCGAAAT CGGTCTCGGT TTTGTGGGCT
CTCTCCGATG CGCACGACCG GGAGGGAATC GAGCAAGGCC ATCGCTCGGC GGTGCTGGCC
GCAACGGCGC GTCTCGAAGC GACCGCCGGC TGGGCCAGAC GTGGCCGGGG CGGCGCCACA
CGGGAGCGAA CCGCGGGCTT GCTGATGGCG CAGTTCGATC ACCACACCAG CCGTGAATCC
GATCCACAGC TCCACACCCA TGCCTTCATC TTCAACCTCG CTCCGCGCCG CGACGGCAGT
TGGGGAGCAA TCCTCAGCCG TGAGCTCTAC AAGGCACAGA AGCACGCTGG CGCAACCTAC
CGACAAGCCC TTGCCTCAGA GCTGGAGCGC CGAGGCATCC GGCTTGAGCG GCAGAAGGAT
ACGTTCCGGG TCGCGGCCAT CCCGCGCGAT GTTGAGCGGG CTTTCTCCAA GCGGCGCCAG
GCCATCGAGG AGGCCGCCCG CATTCATGGC TACAGCACAC CAAAAGGGAT GGAGCTCGCA
ACCCTGCGGA CCCGCCGTCC CAAACAGGAC GCAAGACTCG GCGACCTCAT CAAGCATTGG
CAGGCAGAAG CCAAGGCGCT CGGGTTCGAG CTCGACCAAG ACCGTCAGCA CACGAGGGCA
ATGGCTACCT CCAGCGCGCG ACCTCTCCGA GCTCTGTTGG CGGACCTGTC CAACGCGGCC
TCGCCGATCC AATCGGCAGC AGCGCCGACC GCGGTCGCGG CGGCGGCGGC AAGCACCGAC
CAACAGCGCG CAGCCCAACT CGGGTCGCGG CTCGGCCAAG CTATTCGGGC GTTGGATCAG
CCGGCGGCCA TGGCCGGCGT CAGGATCAAG CTTCGCTATC GAGAGCGCGA GCACGAGTAA
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| Protein sequence | MVASISARGN AASALRYYAH LQRDDYYSRE GEPPGRWAGR GAERLSLVEP VTQGEFDAAL
QGVDPKTGER LAQIGGRGRE HSAGWDMTFS APKSVSVLWA LSDAHDREGI EQGHRSAVLA
ATARLEATAG WARRGRGGAT RERTAGLLMA QFDHHTSRES DPQLHTHAFI FNLAPRRDGS
WGAILSRELY KAQKHAGATY RQALASELER RGIRLERQKD TFRVAAIPRD VERAFSKRRQ
AIEEAARIHG YSTPKGMELA TLRTRRPKQD ARLGDLIKHW QAEAKALGFE LDQDRQHTRA
MATSSARPLR ALLADLSNAA SPIQSAAAPT AVAAAAASTD QQRAAQLGSR LGQAIRALDQ
PAAMAGVRIK LRYREREHE
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