Gene RPC_0645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0645 
Symbol 
ID3970623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp699364 
End bp700026 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content63% 
IMG OID637923762 
Productepoxide hydrolase-like phosphatase 
Protein accessionYP_530537 
Protein GI90422167 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAA AGGCAATCAT TTGGGACTTC GGCGGCGTGT TTACTTCGTC GCCGTTCGAC 
GGATTCCGCG CATTCGAGCA GGCCCGGGGC CTGCCGCGCG ACTTTCTCCG CGGCGTGAAC
GCCACTAATC CGCATGAAAA TGCATGGGCG CAATTCGAGC GCGCCGAGAT CGGCGCCGAG
GCTTTCGATA GCGCCTTCGC CGAGGAATCC GCGGCGCTAG GCTATCGGGT GCGCGGCGCG
GAAGTGTTGT CGCTGCTCTG CTGTGATATC CGGCCGGCGA TGGTCGCGGC ACTGAAAGCG
TGCAAAGGCC GCTACAAGCT CGGCTGCATC ACCAACAACG TTCCGAGCGG CTTTGCGCCG
GGCATGAGCG ACGACGCGGA GGTGGCCGCG GCGATCGCCG ACATTTTCGC ACAGTTCGAT
CACGTCACCG AAAGTTCGAA AGTGGGTCTG CGCAAGCCCG AACCGCGCAT CTACCAACTG
ATGTGCGACG CGTTGCAGAT CGCGCCGCGG TCTTGCGTCT ATCTCGACGA CCTCGGCGTC
AATTGCAAGC AGGCCGCCGC GCTCGGCATG ATCGCGATCA AGGTGCAAAC TGGCGAGCAG
GCGCTCGCCG ACCTGTCGCG TACACTGGGT CATGAACTGG GGAGAACGAC GATCACTGCG
TGA
 
Protein sequence
MTIKAIIWDF GGVFTSSPFD GFRAFEQARG LPRDFLRGVN ATNPHENAWA QFERAEIGAE 
AFDSAFAEES AALGYRVRGA EVLSLLCCDI RPAMVAALKA CKGRYKLGCI TNNVPSGFAP
GMSDDAEVAA AIADIFAQFD HVTESSKVGL RKPEPRIYQL MCDALQIAPR SCVYLDDLGV
NCKQAAALGM IAIKVQTGEQ ALADLSRTLG HELGRTTITA