| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0628 |
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| Symbol | |
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| ID | 3970663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 677004 |
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| End bp | 678221 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637923745 |
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| Product | phage integrase |
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| Protein accession | YP_530520 |
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| Protein GI | 90422150 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.173679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTCA AGAACGACAC CTATTTTCGG CACCTGAAGC CGGCCGAAAA GGATTACAAG
CGATCCGATA GTGGCGGTCT CTTCATGCTC GTCACGAAGA CCGGATCAAA GCTCTGGCGC
TATGGCTACA ACTTTGACGC CAAGCAGAAG CTGCTCGCGC TGGGCCAGTA TCCACTTATC
TCACTCGCGG ATGCCCGCAC CAAGCGCGAC GATGCCAAGA GGTTGTTGGC AGAGGGCATC
GATCCCTCCG TTGAGCGCAA GGCGGAACGC CGAGATGCGC GCATCGCGCG AAGCCATACA
TTTGAGGCCG TGGCCAAAGA ACTCATGGAC AAGTTCGAGG CCGAAGGTGA TGCGCCAACG
ACCCTGAAGA AAAAGCAATG GCTGCTGGAT TTTGCCAACA AGGAGTTTGG CAAGCGGCCG
ATCGCCGAAA TCAAGGCGCC TGAAATCCTA GACGCGCTGA GAAAGATCGA GAAGCGCGGA
AGACATGAGA CCGCGACCCG CGTGCGAAGC ACCGTTGGCG CTGTGTTCCG CTATGGCATT
GCGACCGGAC GAGCCGAACA AGATCCGGCC GCGGACCTGC GCGGCGCTCT GATCACCCCG
ACTGTCACTC ACCGCGCAAC AATCGTCGAG CCTGACGCCG TGGGTGCCTT GCTCCGCGCC
ATTGATGGCT TTGAGGGAAA CGCCGCGATA CGATATGCGC TGAGGCTCGC CCCACTCTTC
TTCGTCCGAC CTGGAGAACT CCGAAAGGCA GAATGGGCGG AGTTCAAGCT TGAAAACGCC
GAATGGCGCA TCCCCGCCGC GAAGATGAAA ATGAGGCGCC CGCATCGGGT GCCTCTCGCC
CATCAGGCAC TGTCCATCCT GCGCGAGCTC CAGGGTATCA CCGGCGGATC GAAATATCTC
TTTCCCTCGG TGCGATCCTG GCATCGTCCG ATCAGTGACA ACACGCTCAA CGCCGTATTG
CGCCGTCTCG GCTATGACAA GACTGAGCTG ACTGTCCATG GGTTACGATC GACTGCATCA
GTGCTGTTGA ACGAAAGCGG CAAATGGCAT GCCGACGCCA TTGAACGTCA GCTTGCACAT
CAAGAGCAGA ATGAGGTCCG CGGCGCCTAT ATTCATGCCG CCGAATTCTG GGACGAACGG
GTGCGGATGA TGTGCTGGTG GGCCGATGAA CTGGATCGAC TGCGAGACCA TGGGCGGGTC
GTTAAGATCC GCGCGTGA
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| Protein sequence | MPVKNDTYFR HLKPAEKDYK RSDSGGLFML VTKTGSKLWR YGYNFDAKQK LLALGQYPLI
SLADARTKRD DAKRLLAEGI DPSVERKAER RDARIARSHT FEAVAKELMD KFEAEGDAPT
TLKKKQWLLD FANKEFGKRP IAEIKAPEIL DALRKIEKRG RHETATRVRS TVGAVFRYGI
ATGRAEQDPA ADLRGALITP TVTHRATIVE PDAVGALLRA IDGFEGNAAI RYALRLAPLF
FVRPGELRKA EWAEFKLENA EWRIPAAKMK MRRPHRVPLA HQALSILREL QGITGGSKYL
FPSVRSWHRP ISDNTLNAVL RRLGYDKTEL TVHGLRSTAS VLLNESGKWH ADAIERQLAH
QEQNEVRGAY IHAAEFWDER VRMMCWWADE LDRLRDHGRV VKIRA
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