Gene RPC_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_0610 
Symbol 
ID3970681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp662479 
End bp663525 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content67% 
IMG OID637923726 
Productsignal-transduction protein 
Protein accessionYP_530502 
Protein GI90422132 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.909822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAG GACTTGGAAA CCGCGCGGCC GTCGTGCCGA CGATCGAGCG ATTGGCCGTG 
AAAGTGCGCG AGGTCATGTC GACCAAGGTG GTGACGGTCG GGCCGGAGGA CACCGCGCGC
TCGGTGGCGC AGACCCTGCT GCACCATGGC ATCAGCGCGG TGCCGGTGGT CGACGATGGC
CGTCCGATCG GTATCGTCAG CGAAGGCGAT CTGATGCCGC GCAACGACGC CGACCGCCAG
GCCGGACGGG ACTGGTGGCT GCGGATGCTG TCGCAAGGCC AGGAGCAGAG CTCCGACTAT
CTGGAATTCC TCAACGCGAC GGACCGCACC GCGCGCGAGG TGATGACCTC GCCGGTGGTC
TCAGTCGACG AGGACGCCGA TCTGGTCGAG GTCGCCGAAT TGCTGTCCTC GAAACGCATC
AAGCGGGTCC CGGTGCTGCG CGACGGCAAG CTGGTCGGCA TCGTCAGCCG TGCCGATCTG
GTGCGGGCGT TCGCCCACCC GGTACCAGCG CACCAGGCCG AGCCGGTGTT CGACGATGGC
TCGCGCTGGC CGGTCGCCTC GGAACGGCTG CAGCAGATTT CCCAGCACGC CGCCCCGCCG
CCGCCGCCGC CGCCGCAGCT CGACATCGCA TTTTCGGCCA AGGCGTTTCA TGATCTGACG
CTGCATTTCG AAGAAGAGGA AGACCGCCGT CGCCACGAGG AGAAGCACCG CGCCGAGGAA
AAGCACCACC AGCAGGCCGA TAAGTTTCTG GCACAGCACC TCACCGAGGA GGCATGGAAG
CGGATGCTGA GCGGCGCCCG CGCCACTGCG ATGAAGGGCG AGCAGGAGCA CCTGCTGCTG
CGCTTTCCCT GCGAAGTGTG CAGCGACCAC GGCCGCGCGG TGAACGCGCC GGACCCGAGC
TGGCCGGAAA CCCTGCGCGG CATGGCCGCG GAGGTCTTCA TGCGCTGGAA AACCGAGCTA
CGCGACCACG GCTTTGCGCT GCATGCCCGT GTGGTGGAAT TCCCCGACGG CGTGCCCGGC
GATATCGGGC TGTTCCTCGC CTGGTAG
 
Protein sequence
MTSGLGNRAA VVPTIERLAV KVREVMSTKV VTVGPEDTAR SVAQTLLHHG ISAVPVVDDG 
RPIGIVSEGD LMPRNDADRQ AGRDWWLRML SQGQEQSSDY LEFLNATDRT AREVMTSPVV
SVDEDADLVE VAELLSSKRI KRVPVLRDGK LVGIVSRADL VRAFAHPVPA HQAEPVFDDG
SRWPVASERL QQISQHAAPP PPPPPQLDIA FSAKAFHDLT LHFEEEEDRR RHEEKHRAEE
KHHQQADKFL AQHLTEEAWK RMLSGARATA MKGEQEHLLL RFPCEVCSDH GRAVNAPDPS
WPETLRGMAA EVFMRWKTEL RDHGFALHAR VVEFPDGVPG DIGLFLAW