| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0575 |
|---|
| Symbol | radC |
|---|
| ID | 3970741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 626833 |
|---|
| End bp | 627561 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637923692 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_530469 |
|---|
| Protein GI | 90422099 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG ATTCCGCCGA CCCCGACGAT CGCACCGAGC CCGGCTTCTT CGCCGAGGCA
CCGCATTATC ACGGCCATCG CGAGCGGCTG CGCGAGCGTT TCCGCAGCGC CGGCGCCGAG
GCGCTGTCGG ACTACGAACT GATGGAGCTG GTGCTGTTTC GCGCGCTGCC GCGGCGCGAC
GTCAAGCCGC TGGCCAAAGC GCTGATCGGC AAATTCGGCT CGTTCGCCGA AACCGTGCAC
GCCTCGGAGC CGCGGCTGCG CGAGATCGCC GGGCTCGGGG AAGCGGCGAT CACCGAGATC
AAGCTGATCG CCGCGGCGGC GAGCCGCGTC GCCAAGGGCG AGCTCAAGCA GCGCGCGGTG
CTGTCGTCGT GGTCGAGCGT GATCGACTAT TGCCGCACCG CGATGGCGTT CGCCGACAAG
GAGCAATTCC GCATCCTGTT TCTCGACAAG CGCAACCAGC TGATCGCCGA CGAATTGCAG
CAGGTCGGCA CCATCGACCA CACCCCGGTG TATCCGCGCG AGATCGTCAA GCGGGCGCTG
GAATTGTCCG CCACCGCGAT CATCATGGTG CACAACCATC CCTCCGGCGA TCCCACCCCG
TCGCAATCCG ACATCACGAT GACCAAACAG ATCATCGACA TCGCGAAGCC GCTCGGCATC
GCGGTGCACG ACCACATCAT CGTCGGCAAG CACGGCCACG CCAGCCTGAA GGGATTGAAG
TTGATCTAG
|
|---|
| Protein sequence | MAADSADPDD RTEPGFFAEA PHYHGHRERL RERFRSAGAE ALSDYELMEL VLFRALPRRD
VKPLAKALIG KFGSFAETVH ASEPRLREIA GLGEAAITEI KLIAAAASRV AKGELKQRAV
LSSWSSVIDY CRTAMAFADK EQFRILFLDK RNQLIADELQ QVGTIDHTPV YPREIVKRAL
ELSATAIIMV HNHPSGDPTP SQSDITMTKQ IIDIAKPLGI AVHDHIIVGK HGHASLKGLK
LI
|
|---|
| |