| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_0553 |
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| Symbol | |
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| ID | 3970756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 600735 |
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| End bp | 601520 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637923669 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_530447 |
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| Protein GI | 90422077 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACGG ATGGGTTGAA TGTGATCGTG ACCGGCTCGG CCTCCGGCCT CGGCGCGGCG
ACGGCGACCA TCTTGGCCAA GGCCGGCGCC CGCATCGTCA TCAACTACGC GTCCAGCCAA
AGCGACGCCG AAGCCACCGC ACAGGCCTGC CGCGCCGCCG GCGCCGCCGA GGTCGTGGTG
GTGCAAGGCG ACGTCGCGCG TGACGAAGAT TGCCGCAAGA TCGTCGCTGC GGCGGCGCCG
TGGGGCCGGC TCGACGCGCT GATCAACAAT GCCGGCACCA CCAAGCACGT GGCGCACGAC
AATCTCGACG GACTTTCGGC GGAGGATTTC CAGCGGCTGT TTGCCGTGAA CACCATCGGG
CCGTTCCAGA TGATCCGCGC CGCGCGGGCG CTGCTGGAAG CCGGCGCGAA GCAATCCGGC
AGCGCCGCCG CGGTGGTCAA CGTGTCGTCG GTGGCCGGCC TCAGCGGCGT CGGCTCGTCG
GTGGCCTACG TCGCCAGCAA GGGTGCGCTG AATTCGATGA CGCTGTCATT GGCCCGCGCG
CTGGCGCCGC TGATCCGGGT CAACACGGTG TGCCCCGGCT ACATCGATAC GCCGTGGTTC
GCCAAGGGCC GCGGCGCCGC CGCCGCGCAG CAGGTGCGAG AGATGGTCAC CGCCAAGGTG
CCGCTGAAGA TTGCCTCGAC GGCGGACGAC GTCGCGGCGT TGGTGTGTTT TCTGGCCTCG
CCGCAGTCCG GCAGCATGAC CGGCGAGTTG GTGCGGATGG ACGCCGGTCT GCATCTGGTG
AATTGA
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| Protein sequence | MPTDGLNVIV TGSASGLGAA TATILAKAGA RIVINYASSQ SDAEATAQAC RAAGAAEVVV
VQGDVARDED CRKIVAAAAP WGRLDALINN AGTTKHVAHD NLDGLSAEDF QRLFAVNTIG
PFQMIRAARA LLEAGAKQSG SAAAVVNVSS VAGLSGVGSS VAYVASKGAL NSMTLSLARA
LAPLIRVNTV CPGYIDTPWF AKGRGAAAAQ QVREMVTAKV PLKIASTADD VAALVCFLAS
PQSGSMTGEL VRMDAGLHLV N
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